Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211600g00005 ATGGCTTCTTCCGCGATGATACCCACCTACACATCCTCGTCTAAGGGCGAGGATATGCAAGTAGACATTGAGAAGAACTCAAAAAGCCATGTAAGGTCCCAGTGGGTTCTTAACCCTCCGGAGCCACCAAGTTCGTGGCGTGTGGTCACGGACTCAGTGGGGAAAAGTATTTCGCGTTTCCGCAAGAACTTTTCTTCACTGAGAGATGAATCATGGACCAAGGTCTTGTTTTCAGCTTTGCAGAAGATTTTTCCTATCCTTGTGTGGGGAAGAAGCTACACTGCAACTAAGTTCAGGAAAGACTTGCTTGCTGGCCTCACTATTGCAAGTCTCTGTATTCCACAGAGCATTGGGTACGCCACCTTAGCAAACCTTGCTCCTCAGTATGGCCTTTATACGAGTGTCGTGCCACCACTGATCTACGCCGTGATGGGAACGTCACAAGAGATAGCAATAGGGCCGGTGGCCGTGGTGTCACTGCTCTTGTCATCGATGGTTGAGAAATTAAGTGATCCTATTTTTAATCCAATTGCTTACACCAAACTCGTCTTACTTGCCACTCTCTTTGCTGGTATTTTTCAGACCGCCTTTGGACTTTTCAGGCTAGGGTTCCTTGTGGATTTCTTGTCACACGCAGCAATAGTTGGATTTGTGGGAGGGGCAGCCATTGTTATTGGGCTTCAACAGTTGAAGGGACTCTTAGGAGTCTCTCACTTTACTACCAAAACCGACATTATCTCTGTCACTAAAGCTGTTTGGCAAGCAATTCATAATCCCTGGAATCCTCGCAATTTCATACTAGGATGCTCGTTCCTGGTCTTCATCCTATCTACTAGATTTCTGGGTAAAAAGAAGAAGAAGCTGTTCTGGTTGGCATCAATTTCGCCTCTACTATCAGTGGTACTATCAACTCTAATGGTTTTTGTGACACGTGCTGATAAGAATGGAGTCAAAATTGTGAAACATGTTAAAGGGGGATTGAATCCAAGCTCCATTCATATGTTGGATTTCAATAATCCCTATGTTGGAGAAGTCGCCAAAATTGGACTAATCATTGCTGTTGTTGCCCTCACTGAATCTGTTGCTGTTGGACGGTCTTTCGCATCCATGAAAGGATACCAACTTAATGGGAATAAGGAAATGCTCTCAATTGGCTTCACCAACATCATTGGATCTTTCACCTCTTGCTATGTTGCTACTGGTTCATTCTCCCGAACTGCTGTGAACTATGCAGCGGGATGTGAAACATTGGTGTCAAACATAGTGATGGGAATGACAGTGTTGATAGCGCTGCAGTTCATGACAAAGTTATTGTATTACACACCAACTGCCATTCTTGCTTCTGTCATCCTCTCAGCACTGCCAGGACTCATAGATGTCAACGAAGCTTTCAGGATTTGGAAGGTTGACAAGTTTGACTTTCTTGCTTGTCTTGCTGCCTTCTTTGGTGTGCTCTTTGCTTCTGTGGAGATTGGTCTTCTTGTCGCAGTGGCAGTATCATTTTCAAAGATAATTGTAATATCAATAAGACCAGGGACAGAAACTCTAGGAAAATTACCAGGAACCGATTTGTTCTATGATGTTAATCAGTATCCAATGGCTGTTAAGATTCCTGGCCTTCTCATCATACGTGTTAAGTCTGCTTTGCTTTGCTTTGCAAATGCCACTTTCGTCCGAGAAAGAATCATGAAATGGGTCAGTGATGAGGAAGAAGAATCAGTGGATGACAAGGGAAATTCAATAACACAAATTCAACTCGTAATCCTTGACATGTCCAATTTGGTGAACATTGACACCTCTGGAATTGCTGCTCTTGAGGAACTGCACAAGAGTTTATCCACACATAAGAAGCAGTTAGCTATTGCAAACCCAAGGTGGCAAGTGATTCACAAGCTGAAGGTATCAAACTTTGTTAACAAAATCAATGGAAGAGTCTTTCTCACTGTTGAAGAAGCTGTTAGCTCCAAGATCCAGTGCTGA 1980 0.4354 MASSAMIPTYTSSSKGEDMQVDIEKNSKSHVRSQWVLNPPEPPSSWRVVTDSVGKSISRFRKNFSSLRDESWTKVLFSALQKIFPILVWGRSYTATKFRKDLLAGLTIASLCIPQSIGYATLANLAPQYGLYTSVVPPLIYAVMGTSQEIAIGPVAVVSLLLSSMVEKLSDPIFNPIAYTKLVLLATLFAGIFQTAFGLFRLGFLVDFLSHAAIVGFVGGAAIVIGLQQLKGLLGVSHFTTKTDIISVTKAVWQAIHNPWNPRNFILGCSFLVFILSTRFLGKKKKKLFWLASISPLLSVVLSTLMVFVTRADKNGVKIVKHVKGGLNPSSIHMLDFNNPYVGEVAKIGLIIAVVALTESVAVGRSFASMKGYQLNGNKEMLSIGFTNIIGSFTSCYVATGSFSRTAVNYAAGCETLVSNIVMGMTVLIALQFMTKLLYYTPTAILASVILSALPGLIDVNEAFRIWKVDKFDFLACLAAFFGVLFASVEIGLLVAVAVSFSKIIVISIRPGTETLGKLPGTDLFYDVNQYPMAVKIPGLLIIRVKSALLCFANATFVRERIMKWVSDEEEESVDDKGNSITQIQLVILDMSNLVNIDTSGIAALEELHKSLSTHKKQLAIANPRWQVIHKLKVSNFVNKINGRVFLTVEEAVSSKIQC 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211600g00005 659 PANTHER SULFATE TRANSPORTER 65 655 IPR001902 GO:0016020|GO:0055085
Stsc211600g00005 659 CDD STAS_SulP_like_sulfate_transporter 531 647 - -
Stsc211600g00005 659 SUPERFAMILY SpoIIaa-like 535 654 IPR036513 -
Stsc211600g00005 659 ProSiteProfiles STAS domain profile. 550 656 IPR002645 -
Stsc211600g00005 659 FunFam Sulfate transporter 31 510 658 - -
Stsc211600g00005 659 Pfam Sulfate permease family 98 479 IPR011547 GO:0016020
Stsc211600g00005 659 Pfam STAS domain 531 652 IPR002645 -
Stsc211600g00005 659 NCBIfam sulfate permease 85 649 IPR001902 GO:0016020|GO:0055085
Stsc211600g00005 659 Gene3D STAS domain 510 657 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211600g00005 Stsc-Chr211600 32714 44396 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211600g00005 32 655 Inorganic Solute Cotransporters AT5G10180 68.269 0.0 879
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211600g00005 K17469 - gmx:100817831 1030.78