Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211600g00003 ATGTTAGCAAGTTTAAATTCGATGTCATGGCAGGGTATAGGATTCGCTACTTTGGCGCAGCTAAGTCCCGAATATGGCTTATACACATGTTTCGCGCCACCTCTTATGTACGCAATGCTTACGAGTTCAAAGGAGATAGTGATTGGGAATGTAGCAGTGGATTCACTTCTCCTTTCTTCAATGATTGCCAAATTGAAAGATCCCATTCAAGATTCTCTTGCATACACTCAGCTTCTTCTCATTGCAACTTTCATTGTTGGTATCTTCCAACTTGCCTTTGGAATCTTCAGGTTTGGATTTCTGGTAGATTATCTTTCACATGCAACAATTGTGGGGTTCTTGGCAGCAGCTGCGGTAGGCATTGGAGCATATCAGTTTATAGTATTGTTAGGAATCAATAAATTCACTACAAAATCTACTGACTTAATTTCTGTCATCAAAATATTTTGGACTTCATTAATCAAGAACCCATCACAGTGGCGTCCTTACAGCTTTACCCTTGGATTCTCGTTTCTTTGTTTCATCCTATTTGCAAGATTCATGGGGAGAAGGAACAAGAAACTGTTCTGGTTGCCAACAATTGCTCCTCTATTTTCAGTTATTGTATCTTCAATTGTTGCATATACAGTGAATTCTCATCAAGTAAATGTGAAGGACTACAAAGTTGACGTGTTAGGAGAAATCAAAGGAGGTAGCTTGAACCCAATCTCATCATTGAATCTCAACCTTATGGACATGTTTTTGGGTCCATTGATCAAAACAGGCTTAACCGTTGCTGTTATTTCACTCACGGAAACTATTGCAGTTGGTAGGTCATTTGCATCACTAAGAGGATACAATCTTGATCCCAATAAAGAAATGATAACATTGGGTTTAACCAACATTGTTGGATCTTTCACTTCTTGTTACGTTGCATCTGGTTCACTATCACGCACTGCACTAAATTATAGTTCTGGTGCTGAAACGACGGTGTCAAGCATAGTGATGGCATTGACGGTTCTAATATCACTGAAATTCTTGACGAGGCTGTTATATTACACTCCAAAGGCAATCTTAGCAGCAATAATAATTTCAATTGTGCCTGGTCTTATTGACATTGAAAAAGCTTATCGGATATGGAAGGTTGATAAACTTGACTTCCTTGCTTGTGCTGGAGCCTTTTTTGGGGTCTTGTTTGGCTCCGTAGAGAAGGGCCTTGCAATTGCGGTGATAATATCATTTGGAAAGTTAATTGTGGTGGCAATTCAACCTGGAATAACGGTTGTTGGAAGGCTTCCTGGAACGGATGTGTTTAGAGACATTGAGCAATATCCAGTGGGCCTCTCTATTCCTGGGCTTTTGATTCTTTCTCCAAAATCTTCCTTCCTTTGCTTTGCAAATGCAACTCTTGTTAGAGAAAGGATTGAGAGATGGGTGAATGATGGACATGTTGAGGAAGGCGAGGGAGGAAGAGGCACTTTAAAATTCATCATTCTTGATATATCAGGTCTTACGAATATTGACACAGCGGGAATTGCTTCTCTAGAGGAACTGAACAACAATTTGATTTCACATGGAGTAAAGTTGGTGATGGCTAACCCAAGGTGGCAAGTGATCCACAAGCTAAGAGTAGCTGACTTTGTGAGCAAAATTGGAGGAAGAGTTTTCGTTTCTGTGGGTGAAGCTGTAGATGCATGTCTTCGTCTTGGTGCTTCAAAAATAATGCCTAATACTGTTTAA 1719 0.3997 MLASLNSMSWQGIGFATLAQLSPEYGLYTCFAPPLMYAMLTSSKEIVIGNVAVDSLLLSSMIAKLKDPIQDSLAYTQLLLIATFIVGIFQLAFGIFRFGFLVDYLSHATIVGFLAAAAVGIGAYQFIVLLGINKFTTKSTDLISVIKIFWTSLIKNPSQWRPYSFTLGFSFLCFILFARFMGRRNKKLFWLPTIAPLFSVIVSSIVAYTVNSHQVNVKDYKVDVLGEIKGGSLNPISSLNLNLMDMFLGPLIKTGLTVAVISLTETIAVGRSFASLRGYNLDPNKEMITLGLTNIVGSFTSCYVASGSLSRTALNYSSGAETTVSSIVMALTVLISLKFLTRLLYYTPKAILAAIIISIVPGLIDIEKAYRIWKVDKLDFLACAGAFFGVLFGSVEKGLAIAVIISFGKLIVVAIQPGITVVGRLPGTDVFRDIEQYPVGLSIPGLLILSPKSSFLCFANATLVRERIERWVNDGHVEEGEGGRGTLKFIILDISGLTNIDTAGIASLEELNNNLISHGVKLVMANPRWQVIHKLRVADFVSKIGGRVFVSVGEAVDACLRLGASKIMPNTV 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211600g00003 572 ProSiteProfiles STAS domain profile. 456 559 IPR002645 -
Stsc211600g00003 572 CDD STAS_SulP_like_sulfate_transporter 437 549 - -
Stsc211600g00003 572 Pfam STAS domain 443 555 IPR002645 -
Stsc211600g00003 572 SUPERFAMILY SpoIIaa-like 443 559 IPR036513 -
Stsc211600g00003 572 Gene3D STAS domain 416 561 IPR036513 -
Stsc211600g00003 572 NCBIfam sulfate permease 11 553 IPR001902 GO:0016020|GO:0055085
Stsc211600g00003 572 PANTHER SULFATE TRANSPORTER 11 559 IPR001902 GO:0016020|GO:0055085
Stsc211600g00003 572 Pfam Sulfate permease family 11 384 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211600g00003 Stsc-Chr211600 13406 23029 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211600g00003 11 562 Inorganic Solute Cotransporters AT5G10180 55.235 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211600g00003 K17469 - gmx:100817841 717.227