Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211600g00002 ATGGTAGCTTCATCAGTAAGTAGTGGCGCAGTGAGTTGCACCTTAGAAGAGATGTTGGAATCTAAAGAGAAAGAAATGTACCAGCATCACTGGGTGCTCAATGCACCAGACCCACCTTGCTTTTTCCGACAACTATTCGAAAATGTTAGGGACACAATCTTGCCCCCGAGTAATAGTAAGAATATGTGTTCAACCCTCATCTTCAACAACAACCAACAACCTTTGCACAAAAGGTTGTTTGAGCTGTTGACGGGGATTTTTCCCATTCTTGGTTCTCTAAAAGGATACAATGTTAGCAAGTTTAAATTCGATGTCATGGCAGGTATAACCGTCGCAAGCCTCGCCATTCCCCAGGGTATAGGATTCGCTACTTTGGCGCAGCTAAGTCCCGAATATGGCTTATACACATGTTTCGCGCCACCTCTTATGTACGCAATGCTTACGAGTTCAAAGGAGATAGTGATTGGGAATGTAGCAGTGGATTCACTTCTCCTTTCTTCAATGATTGCCAAATTGAAAGATCCCATTCAAGATTCTCTTGCATACACTCAGCTTCTTCTCATTGCAACTTTCATTGTTGGTATCTTCCAACTTGCCTTTGGAATCTTCAGGTTTGGATTTCTGGTAGATTATCTTTCACATGCAACAATTGTGGGGTTCTTGGCAGCAGCTGCGAACCCATCACAGTGGCGTCCTTACAGCTTTACCCTTGGATTCTCGTTTCTTTGTTTCATCCTATTTGCAAGATTCATGGGGAGAAGGAACAAGAAACTGTTCTGGTTGCCAACAATTGCTCCTCTATTTTCAGTTATTGTATCTTCAATTGTTGCATATACAGTGAATTCTCATCAAGTAAATGTGAAGGACTACAAAGTTGACGTGTTAGGAGAAATCAAAGGAGGTAGCTTGAACCCAATCTCATCATTGAATCTCAACCTTATGGACATGTTTTTGGGTCCATTGATCAAAACAGGCTTAACCGTTGCTGTTATTTCACTCACGGAAACTATTGCAGTTGGTAGGTCATTTGCATCACTAAGAGGATACAATCTTGATCCCAATAAAGAAATGATAACATTGGGTTTAACCAACATTGTTGGATCTTTCACTTCTTGTTACGTTGCATCTGGTTCACTATCACGCACTGCACTAAATTATAGTTCTGGTGCTGAAACGACGGTGTCAAGCATAGTGATGGCATTGACGGTTCTAATATCACTGAAATTCTTGACGAGGCTGTTATATTACACTCCAAAGGCAATCTTAGCAGCAATAATAATTTCAATTGTGCCTGGTCTTATTGACATTGAAAAAGCTTATCGGATATGGAAGGTTGATAAACTTGACTTCCTTGCTTGTGCTGGAGCCTTTTTTGGGGTCTTGTTTGGCTCCGTAGAGAAGGGCCTTGCAATTGCGGTGATAATATCATTTGGAAAGTTAATTGTGGTGGCAATTCAACCTGGAATAACGGTTGTTGGAAGGCTTCCTGGAACGGATGTGTTTAGAGACATTGAGCAATATCCAGTGGGCCTCTCTATTCCTGGGCTTTTGATTCTTTCTCCAAAATCTTCCTTCCTTTGCTTTGCAAATGCAACTCTTGTTAGAGAAAGGATTGAGAGATGGGTGAATGATGGACATGTTGAGGAAGGCGAGGGAGGAAGAGGCACTTTAAAATTCATCATTCTTGATATATCAGGTCTTACGAATATTGACACAGCGGGAATTGCTTCTCTAGAGGAACTGAACAACAATTTGATTTCACATGGAGTAAAGTTGGTGATGGCTAACCCAAGGTGGCAAGTGATCCACAAGCTAAGAGTAGCTGACTTTGTGAGCAAAATTGGAGGAAGAGTTTTCGTTTCTGTGGGTGAAGCTGTAGATGCATGTCTTCGTCTTGGTGCTTCAAAAATAATGCCTAATACTGTTTAA 1929 0.4132 MVASSVSSGAVSCTLEEMLESKEKEMYQHHWVLNAPDPPCFFRQLFENVRDTILPPSNSKNMCSTLIFNNNQQPLHKRLFELLTGIFPILGSLKGYNVSKFKFDVMAGITVASLAIPQGIGFATLAQLSPEYGLYTCFAPPLMYAMLTSSKEIVIGNVAVDSLLLSSMIAKLKDPIQDSLAYTQLLLIATFIVGIFQLAFGIFRFGFLVDYLSHATIVGFLAAAANPSQWRPYSFTLGFSFLCFILFARFMGRRNKKLFWLPTIAPLFSVIVSSIVAYTVNSHQVNVKDYKVDVLGEIKGGSLNPISSLNLNLMDMFLGPLIKTGLTVAVISLTETIAVGRSFASLRGYNLDPNKEMITLGLTNIVGSFTSCYVASGSLSRTALNYSSGAETTVSSIVMALTVLISLKFLTRLLYYTPKAILAAIIISIVPGLIDIEKAYRIWKVDKLDFLACAGAFFGVLFGSVEKGLAIAVIISFGKLIVVAIQPGITVVGRLPGTDVFRDIEQYPVGLSIPGLLILSPKSSFLCFANATLVRERIERWVNDGHVEEGEGGRGTLKFIILDISGLTNIDTAGIASLEELNNNLISHGVKLVMANPRWQVIHKLRVADFVSKIGGRVFVSVGEAVDACLRLGASKIMPNTV 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211600g00002 642 Gene3D STAS domain 486 631 IPR036513 -
Stsc211600g00002 642 ProSiteProfiles STAS domain profile. 526 629 IPR002645 -
Stsc211600g00002 642 Pfam Sulfate permease family 228 454 IPR011547 GO:0016020
Stsc211600g00002 642 Pfam Sulfate permease family 101 225 IPR011547 GO:0016020
Stsc211600g00002 642 SUPERFAMILY SpoIIaa-like 513 629 IPR036513 -
Stsc211600g00002 642 CDD STAS_SulP_like_sulfate_transporter 507 619 - -
Stsc211600g00002 642 Pfam STAS domain 513 625 IPR002645 -
Stsc211600g00002 642 PANTHER SULFATE TRANSPORTER 232 629 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211600g00002 Stsc-Chr211600 13406 23029 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211600g00002 2 632 Inorganic Solute Cotransporters AT5G10180 49.399 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211600g00002 K17469 - gmx:100817841 762.296