Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211598g00003 ATGACAAGCCACATTGAGAACCTTTGGGTGTTGGCCTTGGCCTCAAAATGCACTCAAGAGAACATTGCATGGTCACTTTTGATCATGGCCACACTCATATGGCTAACCATGTCCTTCTATTACTGGTCTCACCCTGGTGGTCCTGCCTGGGGCAAGTACTACTGCTACTACTACTACCACCGCTATTGCTCCAATTGGACATCCAAAAGGACATCCTTAACGACACCTCATCAACAACGTTGCTTTTCATCAAACAAGGATAACAATATCATTCCTGGCCCCAAAGGGTACCCTATTATTGGGAGCATGACCCTTCTGTCCTCCCAGCTCGCACACCATCGCATCTTCGCGGCTGCTAAAGCATGCAACGCCACGAGGCTGATGGCGTTCAGTCTGGGGGACACAAGGGCCATAGTCACGTGCCACCCAGACGTGGCACGTGAGATTCTTAACGGGACGGTATTCGCGGACCGTCCTGTTAAGGAATCCGCATACAGCCTCATGTTCAACCGGGCCATCGGTTTTGCGGCACACGGCACTTATTGGCGCACCATCCGCCGCATCGCCGCCGCGCACCTCTTTTCGCCTAAACAAATTAAGGCGTCGGAGACCCAAAGGGCGGAAATCGCCACCAACATGATTGCAACGCTTGGCGGCGGTTGCGGTGGCGCCGCTGTGGCGACGGTGCGTGAAGCGCTGAAAACGGCGTCGTTGAGCCACATGATGAGGTTGGTTTTTGGGTATAAGAAAAACATGGGAATGGAAGGTGAGCTGAGAGGATTGGTGGAAGAAGGATATGATCTATTGGGTACCCTTAATTGGGGGGATCACCTGCCCTTCCTAAGGGACTTTGATTTTCAGAGAATCCGGTTCAGGTGTACGGAACTGGTTCCGAAGGTGAACCGGTTCGTTGGTTCGATCATCGATGAACACCGAACCGACAAGAACAGGAACAGCGCCAACAAGGATTTCGTTGATGTCTTGCTCTCTCTCCAAGGACCCGATAAATTGTCTGATTCCGACATGATTGCTGTTCTTTGGGAAATGATTTTTAGGGGAACCGACACGGTGTCCGTATTGATAGAGTGGATTTTAGCAAGAATGGTTCTTCATCCAGACGTGCAGCGCAAGGTTCAGGATGAGCTTGATATGGTAACCGGCTCACGTGGCACTGTAATAGAGGATGACATGGCAGCTTTAGTGTACCTTCAAGCAGTGGTGAAGGAAGTTCTAAGGCTTCACCCTCCGGGTCCACTTCTTTCATGGGCCCGGTTGGCCATAACCGAAACCACTATTGATGGATATCATGTGCCCAAAGGGACTACGGCTATGGTCAACATGTGGGCCATAGCTCGCGATCCGTCAATATGGAAGGAGCCACTTGAATTTAAACCCGAGAGGTTTATTGAAAATGGAGGAGGTCTTGAGTTTTCTGTTTTCGGGTCGGATCTTAGACTCGCCCCATTCGGGTCTGGTCGACGAGTTTGTCCTGGAAAGACCTTAGGTCTAGCCACCGTGACATTTTGGGTGGCATCACTCTTGCACAAGTTTGAATGGCTACCTTTAGATGATGGAATGGATGGTGTTGATCTCTCAGAAGTTTTAAGGCTCTCATGTGAAATGGCCAAGCCTCTTACCGTTAAGGTTTGCCCTAGGCACAGTGCTAGTACTATTAAGTCAAGTTAA 1686 0.5024 MTSHIENLWVLALASKCTQENIAWSLLIMATLIWLTMSFYYWSHPGGPAWGKYYCYYYYHRYCSNWTSKRTSLTTPHQQRCFSSNKDNNIIPGPKGYPIIGSMTLLSSQLAHHRIFAAAKACNATRLMAFSLGDTRAIVTCHPDVAREILNGTVFADRPVKESAYSLMFNRAIGFAAHGTYWRTIRRIAAAHLFSPKQIKASETQRAEIATNMIATLGGGCGGAAVATVREALKTASLSHMMRLVFGYKKNMGMEGELRGLVEEGYDLLGTLNWGDHLPFLRDFDFQRIRFRCTELVPKVNRFVGSIIDEHRTDKNRNSANKDFVDVLLSLQGPDKLSDSDMIAVLWEMIFRGTDTVSVLIEWILARMVLHPDVQRKVQDELDMVTGSRGTVIEDDMAALVYLQAVVKEVLRLHPPGPLLSWARLAITETTIDGYHVPKGTTAMVNMWAIARDPSIWKEPLEFKPERFIENGGGLEFSVFGSDLRLAPFGSGRRVCPGKTLGLATVTFWVASLLHKFEWLPLDDGMDGVDLSEVLRLSCEMAKPLTVKVCPRHSASTIKSS 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211598g00003 561 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 489 498 IPR017972 GO:0005506|GO:0016705
Stsc211598g00003 561 PRINTS E-class P450 group I signature 486 496 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211598g00003 561 PRINTS E-class P450 group I signature 496 519 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211598g00003 561 PRINTS E-class P450 group I signature 361 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211598g00003 561 PRINTS E-class P450 group I signature 404 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211598g00003 561 PRINTS E-class P450 group I signature 341 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211598g00003 561 PRINTS E-class P450 group I signature 446 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211598g00003 561 Pfam Cytochrome P450 92 524 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211598g00003 561 CDD CYP78 123 545 - -
Stsc211598g00003 561 Gene3D Cytochrome P450 78 555 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211598g00003 561 PANTHER CYTOCHROME P450 78A7-RELATED 1 552 - -
Stsc211598g00003 561 FunFam Cytochrome P450 78A5 83 552 - -
Stsc211598g00003 561 PRINTS P450 superfamily signature 352 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211598g00003 561 PRINTS P450 superfamily signature 487 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211598g00003 561 PRINTS P450 superfamily signature 496 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211598g00003 561 PRINTS P450 superfamily signature 405 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211598g00003 561 SUPERFAMILY Cytochrome P450 91 552 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211598g00003 Stsc-Chr211598 34663 37525 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211598g00003 1 552 Cytochrome P450 AT1G01190 60.714 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211598g00003 K20619 - gmx:100815292 756.133