Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211594g00015 ATGAGGAATTCTGGAGTGGTGGAACGCATGTCAGAATGCTTCATCAAGCCACACCTCCCCACAAAGGAATCAACCCAATTCTTCCACTTAACACCTTGGGATATTGTCCCCTTGTCTATTCATTATATCCAGAAAGGCCTGCTTTTCATGAAACCACAAAACCAGCCACAAGATTTTACCCATAATCTGTTGCATAATCTCAAGCATTCCCTCTCTCTTACCCTTGTCCATTTCTATCCACTTGCAGGACGCCTTGTGACTCACCAAACCCAAAACCCTCCCTCTTATTCTGTCTCTGTTGATTGCATCAACTCTCCAGGAGCAAGATTCATCCATGCAACCTTAGACCTCACTGTATCCGATATCCTCTCTCCTGTCCATGTCCCACCCATTGTTCACTCATTTTTCGACCTCAACAAAGCAGTTAACCATGATGGTCACACCATGCCTCTCTTCTCTGTCCACATCACCGAGCTAATTGATGGTGTTTTCATAGGCTGTTCCATGAACCACTGTGTAGCTGATGGCACTTCTTATTGGAGCTTCTTCAACACATGGTCTGAGATCTTTCAATCTCAAGCCAAAGGGGAAGATTTTAAGATCTCTCACCAACCAATACACAAGCGCTGGTTTCGAGAGAGTTGTGGTCCGCTAATTAATCTTCCCTTCAAACACCATGACGAGTTTATCTGTAGATACGAAGCACCCAAGCTGAGAGAGAGGATCTTCCACTTCACAGCTGATTCCATCGCAAAACTCAAAGCCAAAGCCAACAAAGATTCCAACACCAGCGAAATCTCTTCGTTCCAATCGTTGTCAGCTCACGTTTGGAGAAGCATAACACGTGCTCGGAGCGTGCCATCTGATGAAAGAAGCAGCTGCATAGTGGTGACAAACAACCGAACGAGAATGGAACCGCCTTTGCCACAGGACTACTTCGGAAACTCAGTTAATTCTGTTAAGGCGGTTGCAACAGCTGGGGAGCTGGGAGAGCATGATCTGGGATGGGCAGCGTGGAAGGTGCACGAAGCTGTTGCAAAGTACAACCACAGAGTGGTGATGAATTGGCTCAAAGAGTGGCTGAGATCCCCTGCTATTCATCAAACTGGTGGCTTTGTTGATCCGTACAGTGTAGTGATGAGCAGTTCTCCAAGGTTCAATGTTTATGGGAATGAGTTTGGAATGGGGAAAGCTGTGGCGGTTCTGAGTGGATATGCCAACAAGTATGACGGAAAGGTGACGTCATATCCTGGGCGCGAAGGTGGGGGAAGCATTCAATTGGAGGTGTGTCTTTCTCCTCATACAATGAGCGCTTTGGAATCTGACCAACACTTCATGGATACGGTTACTGTGTCCTCTAGTTTAGAGACTTTCACTATTTCTCTTTAG 1389 0.4636 MRNSGVVERMSECFIKPHLPTKESTQFFHLTPWDIVPLSIHYIQKGLLFMKPQNQPQDFTHNLLHNLKHSLSLTLVHFYPLAGRLVTHQTQNPPSYSVSVDCINSPGARFIHATLDLTVSDILSPVHVPPIVHSFFDLNKAVNHDGHTMPLFSVHITELIDGVFIGCSMNHCVADGTSYWSFFNTWSEIFQSQAKGEDFKISHQPIHKRWFRESCGPLINLPFKHHDEFICRYEAPKLRERIFHFTADSIAKLKAKANKDSNTSEISSFQSLSAHVWRSITRARSVPSDERSSCIVVTNNRTRMEPPLPQDYFGNSVNSVKAVATAGELGEHDLGWAAWKVHEAVAKYNHRVVMNWLKEWLRSPAIHQTGGFVDPYSVVMSSSPRFNVYGNEFGMGKAVAVLSGYANKYDGKVTSYPGREGGGSIQLEVCLSPHTMSALESDQHFMDTVTVSSSLETFTISL 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211594g00015 462 FunFam Tryptamine hydroxycinnamoyl transferase 224 443 - -
Stsc211594g00015 462 Gene3D - 231 442 IPR023213 -
Stsc211594g00015 462 Gene3D - 9 219 IPR023213 -
Stsc211594g00015 462 Pfam Transferase family 7 445 - -
Stsc211594g00015 462 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 10 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211594g00015 Stsc-Chr211594 73793 75181 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211594g00015 67 440 Monolignol Biosynthesis Gene Families AT5G48930 28.030 2.31e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211594g00015 - - gmx:100775661 661.759