Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211594g00014 ATGGATAGCACTTGCTCCGCTTCTGTTCAAATCGTTTCAGAATGCTTCGTGAAGCCACACCACCAGACACAAGACTCAACACAAGTCTACCATCTAACACCATGGGATCTTGCCATGCTATCCGCACATTACATCCAAAAGGGTCTTCTCTTCAAGAAGCCACAAAACCAACCTCCAGATTTCACACAAAATCTATTGCAAGATCTCAAGCACTCCCTCTCTCTTACCCTTGTCCATTTCTATCCCTTGGCTGGTCGCCTTGTCACTCACCAAACCCAAGACCCTCCTTCTTATTCTATCTCCGTTGACTGCGTCAACTCTCCGGGAGCAAGATTCATCCATGCAACCGCAGATCTCACTGTATCTAATATCTTCTCCCCGGTTGATGTCCCTCCAATCGTAAAGTCATTCTTTGATCATGATAGAGCAATCAACCATGATGGCCACCACATGTCCCTATTAACCATCGAAGTCACTGAGCTAATCGACGCTCTTTTCATTGGCTGCTCCATGAACCATGCCCTCGCTGATGGTACTTCCTACTGGAAATTCTTTAACGCATGGTCTGAGATCTTTCAATCTCAATCTCAACTCAAAGGGGAAGAAGAAGCCTCTGATGTTGCTAACATCATTTCCCACAAACCCATTCTCAAGCGCTGGCTTCCACATGGTTGCGATCCAATAATCAATCTTCCATTTAAACACCCTGATGAGTTTGTTTGTAGATTCGAAGCACCAAAACTCAGAGAGAGGATCTTCCGCTTCAGTGCAGAATCAATTGCTAAACTGAAAGCTAAGGCAAACAAGGAATCCAACACCAACAAAATATCTTCTTTCCAATCATTATCAGCACTTGTTTGGAGATGCATCACTCGTGCTCGCAGCTTACCTCATGATAAAAAGACGAGTTGTAAGCTGGCAATGAACAACAGAAGCAGAATGGAACCGCCTCTGCCTGAAGAATACTTTGGGAACTCACTTCATGCGGTGAGTGCATATACCACAGCAGGAGAATTGCTTGAACATGATCTGGGGTGGGCAGCGTGGAAGATTCACCTGGCTGTTGTGAACCATAACAATGGATTGGCGCTTCAGTATCTCGAAGAGTGGTTAAAGTCTCCTGTGATCTATCAACATGCTCGGTTCTTTGAACCGGACAGTGTGATGATGGGTAGCTCACCAAGATTCAACATGTATGGAAATGAATTTGGAATGGGAAAAGCGGTGGCAGTTCTGAGCGGATATGCTAACAAATTTGATGGAAAAGTAACGTCATACCCAGGCCGTGAAGGAGGTGGAAGCGTTGACTTAGAAATGTGTCTTTTTCCAGATTCAATGTGTGCGCTTGAATCAGATCCAGAGTTCATGAATGCAGTTTCATCATCCGGTTGA 1392 0.449 MDSTCSASVQIVSECFVKPHHQTQDSTQVYHLTPWDLAMLSAHYIQKGLLFKKPQNQPPDFTQNLLQDLKHSLSLTLVHFYPLAGRLVTHQTQDPPSYSISVDCVNSPGARFIHATADLTVSNIFSPVDVPPIVKSFFDHDRAINHDGHHMSLLTIEVTELIDALFIGCSMNHALADGTSYWKFFNAWSEIFQSQSQLKGEEEASDVANIISHKPILKRWLPHGCDPIINLPFKHPDEFVCRFEAPKLRERIFRFSAESIAKLKAKANKESNTNKISSFQSLSALVWRCITRARSLPHDKKTSCKLAMNNRSRMEPPLPEEYFGNSLHAVSAYTTAGELLEHDLGWAAWKIHLAVVNHNNGLALQYLEEWLKSPVIYQHARFFEPDSVMMGSSPRFNMYGNEFGMGKAVAVLSGYANKFDGKVTSYPGREGGGSVDLEMCLFPDSMCALESDPEFMNAVSSSG 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211594g00014 463 Gene3D - 8 227 IPR023213 -
Stsc211594g00014 463 Gene3D - 242 451 IPR023213 -
Stsc211594g00014 463 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 10 457 - -
Stsc211594g00014 463 Pfam Transferase family 8 456 - -
Stsc211594g00014 463 FunFam Tryptamine hydroxycinnamoyl transferase 237 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211594g00014 Stsc-Chr211594 71701 73092 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211594g00014 67 450 Monolignol Biosynthesis Gene Families AT5G48930 27.000 8.26e-34 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211594g00014 - - gmx:100789881 662.529