Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211594g00007 ATGAACTTCAAGAATTTCGGCAACGACCCTGGCCCAGCCGCCGGAGGAAGCGGCGCTGCTGGGAGACCGCCGGGGAATTTCTCCCTGACGAGGCAGCCTTCGGTGTACAATCTGACGTTCGATGAGTTCATGAACACCATGGGAGGTTCAGGGAAGGACTTCGGGTCCATGAACATGGACGAGCTTCTTAAAAACATATGGACTGCTGAGGAGGTTCAAACGATGGCGTCCGCCACAGGTGTCGGTGGAGAACAGGGCTCCGCCGGCTTCGGCGGCGCCGGCGTCAACGGTTTGCAGAGGCAGGGATCGTTGACGCTCCCGCGAACGCTGAGTCAGAAGACAGTAGATGAGGTCTGGAAAGACATTTCGAAGGAGTACGGCGGGGGGTCCACCGGTGCCGGTGCCGGTGCCGGTGCCGGCGGAGGCACAAATCTGCCGCAGACGACGCCGCGGCAGCCGACGTTGAAAGAGATCACGCTGGAAGAATTCTTGGTGAGAGCAGGTGTTGTTAGAGAAGACGCGCAATTGGCAGCTGCTGGGAAAGCAAACGACAGCGTTTTTGTTGGAGGGGGGTTTCAGCAGTTGAACAATGATCCTCTGGTTGGTCTTCAGGCAGCAACTAATTTGCCTGTGAATGTTAATGGAGTTAGATCTTCCAATCAGCAGATGCAGAATTCACAGTCCCCTCATCAGCCGCAGATATTCCCCAAACAAGCTCCTATGAGCTATGCTATGCCTCTGACGAGTGGAATTGTGCAAGGTGGAGGAGGGATGGGGATGGTTGGTTTGTCACCTACTGGGGCTGTTCATGTTGGTACTGGCTCGCCGGCTAGCCAGATTTCCAATGATAAAATGGGAAAGAGCAATGGAGATACTTCTTCGGTTTCTCCGGTGCCTTATGTGTTTAATGGTGGGATGAGGGGGAGGAAGAGCGGTGGAGCAGTTGAGAAGGTGATTGAAAGGAGGCAGAGGAGAATGATCAAGAACAGAGAGTCAGCAGCTAGGTCTCGCGCCAGAAAGCAGGCTTATACCATGGAATTGGAAGCAGAAGTTCAAAAGTTGAAAGAAGAGAACCAAGAACTTCAGAAAAAGCAGAAAGAAATCATGGAAATTCAGAAAAATCAAGTTATGGAAATGATGAATTTGCAACGAGACGGCAAGAGAAGATGCTTAAGACGAACACAAACTGGTCCATGGTAG 1200 0.5225 MNFKNFGNDPGPAAGGSGAAGRPPGNFSLTRQPSVYNLTFDEFMNTMGGSGKDFGSMNMDELLKNIWTAEEVQTMASATGVGGEQGSAGFGGAGVNGLQRQGSLTLPRTLSQKTVDEVWKDISKEYGGGSTGAGAGAGAGGGTNLPQTTPRQPTLKEITLEEFLVRAGVVREDAQLAAAGKANDSVFVGGGFQQLNNDPLVGLQAATNLPVNVNGVRSSNQQMQNSQSPHQPQIFPKQAPMSYAMPLTSGIVQGGGGMGMVGLSPTGAVHVGTGSPASQISNDKMGKSNGDTSSVSPVPYVFNGGMRGRKSGGAVEKVIERRQRRMIKNRESAARSRARKQAYTMELEAEVQKLKEENQELQKKQKEIMEIQKNQVMEMMNLQRDGKRRCLRRTQTGPW 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211594g00007 399 CDD bZIP_plant_BZIP46 321 375 - -
Stsc211594g00007 399 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 319 376 - -
Stsc211594g00007 399 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 29 399 IPR043452 GO:0003700|GO:0045893
Stsc211594g00007 399 SUPERFAMILY Leucine zipper domain 321 370 IPR046347 GO:0003700|GO:0006355
Stsc211594g00007 399 MobiDBLite consensus disorder prediction 275 295 - -
Stsc211594g00007 399 MobiDBLite consensus disorder prediction 129 151 - -
Stsc211594g00007 399 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 319 370 IPR004827 GO:0003700|GO:0006355
Stsc211594g00007 399 SMART brlzneu 317 382 IPR004827 GO:0003700|GO:0006355
Stsc211594g00007 399 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 324 339 IPR004827 GO:0003700|GO:0006355
Stsc211594g00007 399 Coils Coil 337 374 - -
Stsc211594g00007 399 Pfam bZIP transcription factor 321 372 IPR004827 GO:0003700|GO:0006355
Stsc211594g00007 399 Gene3D - 319 375 - -
Stsc211594g00007 399 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211594g00007 Stsc-Chr211594 24251 28095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211594g00007 1 399 bZIP Transcription Factor Family AT3G19290 45.455 3.32e-93 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc211594g00007 bZIP_1 3.7e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211594g00007 K14432 - gmx:100101876 480.715