Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211594g00001 ATGGCTGTGGCAATAGGAAGAAACTTCCCTTTTCAGCCATGCACTTCCTTAAGAAATAAGAGCATAGTCAGACATAAACCTTCACGAGGCATAACATACTTGTGGCTCCACCCTGCTGCAGGAGCCAGAGTAACGAACGGACGCAGTAGGCAAATTTGTGCAGCAGCGCAACAGCGAGCAACATGGCTTCCAGGACTCGATCCCCCGCCTTATCTGGACGGAACTTTGGCTGGAGATTTCGGGTTTGACCCTCTTGGACTCGGAGAGGATCCTGAAAGCTTGAGATGGTACGTGCAAGCAGAACTAGTCCACTGTCGCTTTGCCATGCTTGGAGTGCTGGGAATTCTTGCCACAGATTTACTCCGTGTCACAGGACTTAGTAAGATCCCAGTTTGGTTTGAAGCTGGTGCAGTGAAATATGACATTGCCAACACACAGACACTTTTAGTTGTTCAATTACTCTTGATGGGGTTTGTTGAAACAAAAAGGTACATGGATTTTGTTAGCCCTGGATCTCAAGCTAAA 525 0.4743 MAVAIGRNFPFQPCTSLRNKSIVRHKPSRGITYLWLHPAAGARVTNGRSRQICAAAQQRATWLPGLDPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHCRFAMLGVLGILATDLLRVTGLSKIPVWFEAGAVKYDIANTQTLLVVQLLLMGFVETKRYMDFVSPGSQAK 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211594g00001 175 Gene3D Chlorophyll a/b binding protein domain 69 175 - -
Stsc211594g00001 175 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 49 165 IPR001344 GO:0009765|GO:0016020
Stsc211594g00001 175 Pfam Chlorophyll A-B binding protein 68 173 IPR022796 -
Stsc211594g00001 175 SUPERFAMILY Chlorophyll a-b binding protein 55 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211594g00001 Stsc-Chr211594 11 806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211594g00001 49 172 Chloroplast and Mitochondria Gene Families AT3G61470 50.000 2.25e-39 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211594g00001 K08911 - gmx:100804934 241.891