Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211593g00008 ATGGCACCAGGGCCTGGTTGCACATCTCAGATAACTATGCTGAGTGGTGGTGGTGGTGTTGGCGGCGGCGCGGGTTGCGTGGAGAGCAGTACTAGTAGTGAGTCTGCCATGGAGGATCAAAATGGTGACACAGTTGGGAATTTGAATCACAATATTGGGAAGCCTCCAAGGGACCATTCTGTTATGAGACACTGCACCAGCTCTTCATGGTTGATTGATCCTGATTGCATAAATCCCAATGAACCACACACTCCCTCCATTCTCTTTGAATTGGAATCAGATATTATGATTATAGGGTTGAAAACAACTAGCGAGGAAAAATCAGAGTTTTCACCAAAATTAAGGTCTGGAAGCTGTTCTGAGAAAGGACCAAAGCAGTACATGGAGGATGAATTCCTGTGTGTTGATATTCTCCGTGAACACACTGGTCCAGCTGTGAACCTTCCTTCTCCAGCAGCATTTTATGGGGTGTTTGATGGGCATGGTGGCGTTGATGCAGCATCATTTACAAGAAAGAACATCCTTAAGTTTATAATTGAAGATTCTCATTTCCCATCTGGAATCAAGAAAGCTGTGAATGGTGCTTTTGTGAAGGCTGATCATGCATTCAGGGATACTAGTTCTCTTGATAGTTCTTCCGGCACCACCGTCCTAATCGCCATTGTCTTGGGAAGGGACATGCTAATTGGAAATGCAGGGGATTCTAGAGCGGTTTTAGGGAAAAGGGGAAGAGCCATTGAACTTTCCAAGGACCATAAACCAAATTGCACATCAGAAAGACTAAGAATTGAGAAACTCGGCGGTGTGATCTACGACGGTTACCTTAACGGCCAACTGTCAGTGGCTCGAGCCTTAGGAGACTGGCACATCAAAGGATCAAAAGGGTCCAAGAGTCCCTTAAGCTCAGAGCCAGAGCTAGAGGAGATAGTCCTAACTGAAGAGGATGAGTTCTTGATAATGGGGTGTGATGGACTTTGGGATGTGATGAGTAGCCAGTGTGCTGTGACAATGGTTAGGAGGGAGCTGATGCAGCACAATGATCCAACAGAATGCGCGAAAGCGCTCGTCGCGGAAGCGATTCAGCGAAACACTTGTGATAATCTGACAGTTTTGGTGGTTTGTTTCTCAATGGATCCTCCTCCAAAGATTGAGATTCCTAGAGCTCATAGGAGAAGGAGTATTTCAGCTGAAGGCCTTGATCTTCTCAAGGGTGTCTTGAATGGTAGATAG 1230 0.4593 MAPGPGCTSQITMLSGGGGVGGGAGCVESSTSSESAMEDQNGDTVGNLNHNIGKPPRDHSVMRHCTSSSWLIDPDCINPNEPHTPSILFELESDIMIIGLKTTSEEKSEFSPKLRSGSCSEKGPKQYMEDEFLCVDILREHTGPAVNLPSPAAFYGVFDGHGGVDAASFTRKNILKFIIEDSHFPSGIKKAVNGAFVKADHAFRDTSSLDSSSGTTVLIAIVLGRDMLIGNAGDSRAVLGKRGRAIELSKDHKPNCTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGSKGSKSPLSSEPELEEIVLTEEDEFLIMGCDGLWDVMSSQCAVTMVRRELMQHNDPTECAKALVAEAIQRNTCDNLTVLVVCFSMDPPPKIEIPRAHRRRSISAEGLDLLKGVLNGR 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211593g00008 409 SMART PP2C_SIG_2 133 375 IPR001932 -
Stsc211593g00008 409 SMART PP2C_4 105 373 IPR001932 -
Stsc211593g00008 409 Gene3D - 98 378 IPR036457 -
Stsc211593g00008 409 PANTHER PROTEIN PHOSPHATASE 2C 103 373 IPR015655 GO:0004722|GO:0006470
Stsc211593g00008 409 MobiDBLite consensus disorder prediction 18 47 - -
Stsc211593g00008 409 CDD PP2Cc 115 375 IPR001932 -
Stsc211593g00008 409 ProSitePatterns PPM-type phosphatase domain signature. 154 162 IPR000222 GO:0043169
Stsc211593g00008 409 MobiDBLite consensus disorder prediction 26 47 - -
Stsc211593g00008 409 ProSiteProfiles PPM-type phosphatase domain profile. 115 375 IPR001932 -
Stsc211593g00008 409 FunFam Probable protein phosphatase 2C 22 100 378 - -
Stsc211593g00008 409 SUPERFAMILY PP2C-like 107 375 IPR036457 -
Stsc211593g00008 409 Pfam Protein phosphatase 2C 116 367 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211593g00008 Stsc-Chr211593 30710 32352 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211593g00008 98 407 PP2C-type Phosphatase Gene Family AT3G51470 76.452 2.44e-175 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211593g00008 K14803 - gmx:100786416 568.54