Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211592g00002 ATGGTGTGCATAAGGAAGGCAACGGTGGATGACCTGCTGGCTATGCAGGCATGCAACCTCTTTTGCCTGCCAGAGAACTACCAGATGAAATACTACCTCTACCACATCCTTTCTTGGCCTCAGCTCCTCTACGTCGCTGAGGATTACAATGGTCGCATTGTTGGCTATGTCCTCGCCAAGATGGAGGAGGAGACTTCCGAGTGCCATGGCCACATCACCTCGCTCGCCGTCCTCCGCACCCACCGCAAGCTTGGTCTTGCCACCAAACTCATGACCGCCGCTCAGAATGCCATGGAACAGGTGTTTGGTGCTGAGTATGTCTCTCTGCATGTCAGAAAGAGCAATCGTGCTGCATTTAATTTGTACACGGAGACATTGGGTTACAAGATTCATGATGTGGAGGCGAAGTATTATGCAGATGGGGAGGATGCTTATGACATGAGGAAGCAGCTCAAGGGGAAGCAGACGCATCAGCATCATCACGGTGGGGGTCATCACCACCATCATCATCACCACCACCACCACCATGGTGGTGGCTGTTGTTCTAGTGAAGCAAAGGCAGAGAAGACAGAGACGAGAAATGCGAAGGGCACCTGA 597 0.5226 MVCIRKATVDDLLAMQACNLFCLPENYQMKYYLYHILSWPQLLYVAEDYNGRIVGYVLAKMEEETSECHGHITSLAVLRTHRKLGLATKLMTAAQNAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADGEDAYDMRKQLKGKQTHQHHHGGGHHHHHHHHHHHHGGGCCSSEAKAEKTETRNAKGT 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211592g00002 198 MobiDBLite consensus disorder prediction 178 198 - -
Stsc211592g00002 198 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 151 IPR016181 -
Stsc211592g00002 198 Gene3D - 2 193 - -
Stsc211592g00002 198 CDD NAT_SF 43 110 - -
Stsc211592g00002 198 PANTHER N-TERMINAL ACETYLTRANSFERASE 1 177 IPR045047 GO:0004596|GO:0006474|GO:0031415
Stsc211592g00002 198 MobiDBLite consensus disorder prediction 153 177 - -
Stsc211592g00002 198 FunFam N-alpha-acetyltransferase daf-31-like 2 180 - -
Stsc211592g00002 198 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 152 IPR000182 GO:0016747
Stsc211592g00002 198 Pfam Acetyltransferase (GNAT) family 39 128 IPR000182 GO:0016747
Stsc211592g00002 198 MobiDBLite consensus disorder prediction 151 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211592g00002 Stsc-Chr211592 17603 19980 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc211592g00002 Acetyltransf_1 2.2e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211592g00002 K20791 - qsa:O6P43_029596 333.954