Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211592g00001 ATGGATCGTAACAAAAAGGGTACAGCGGAGGATAAGTTTTTTACTGAGTATGGAGAGGCAAGCCGATACGAGATCCAAGAAGTTGTTGGAAAAGGAAGTTATGGTATCGTGGGTGCTGCCGTTGACACTCGTACTGGGGAAAAGGTTGCAATTAAGAAAATTAATGATGTTTTTGAGCATGTATCGGATGCGACACGAATCCTAAGAGAAATAAAGCTACTTCGGTTGCTCCGACATCCTGATATAGTAGAAATTAGGCATATAATGCTTCCTCCTTCCCGAAGAGAGTTCAAGGATGTCTATGTTGTGTTTGAGTTGATGGACTCTGACCTTCATCAAGTCATTAAGGAGAATGATGATCTTTCTCCTGAGCACTACCAGTTTTTCTTGTACCAACTTCTTCGGGGTCTAAAATACATACATTCAGCTAATGTCTTTCATCGTGACTTAAAGCCAAAAAATATTCTTGCTAATGCTGATTGCAAAATTAAGATATGTGATTTTGGGCTTGCTCGAGTATCATTCAATGAAGCTCCGTCAGCCATTTTCTGGACTGATTATGTCGCAACTCGATGGTATCGTGCACCTGAACTATGCGGTTCTTTTTTCTCAAAATATACCCCCGCTATTGATATTTGGAGCATTGGATGCATATTTGCAGAAATGCTCACCGGGAGGCCATTGTTTCCTGGGAAAAATGTGGTGCATCAACTGGATCTCATGACCGATTTGCTTGGTACTCCTCCTGCTGAATCCATTTCCAGGATTCGAAATGAGAAGGCTAGAAGGTATCTTAGTAGCATGCGGAAAAAGCAACCAGTTCCCTTCACCAAAAAATTTCCAAATGCAGATGTGACAGCTCTTCGTTTGCTGGAGCGGCTACTTGCATTTGATGCTAAAGATCGTCCAACAGCTGAAGAGGCATTAGCTGATCCTTACTTCCATGGTTTAGCTAATGTAGATCGAGAACCATCCACTCAACCCATTTCAAAGCTTGAGTTTGAGTTTGAGAGAAGGAAATTGACCAAAGATGATGTCCGAGAGCTGATTTATCGAGAGATTCTAGAGTATCATCCACAGATGCTCCAAGAATATCTTCGTGGTGGAGATCAAACAAGTGGCTTCATGTATCCAAGTGGGGTTGATCGGTTTAAGCGACAATTTGCACATCTTGAGGATCTTAAAGGTAAAGGTGAACGAAGCACCCCGTTGCAGAGACAGAATGTCTCCTTACCTAGAGAGCGAGTTCCTGCTTCTAATGATGAAACTGGCAAGGATGGTGAACAACCAAGTGGATCAAATCTTGAGAATACTTCAGATACACCTGGTTCACGGAGCTTGTTGAAGAGTGCTAGCATTACTTCCAAGTCTTATGTCAAAGCAAATAGAGATCCAGAGGAGCCAATTCCGGAAGCCAATGATGAGAAGGTGGCAGAGATGACGGAGAAAATCGCTGTCCTCCATACTTAG 1470 0.4259 MDRNKKGTAEDKFFTEYGEASRYEIQEVVGKGSYGIVGAAVDTRTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIRHIMLPPSRREFKDVYVVFELMDSDLHQVIKENDDLSPEHYQFFLYQLLRGLKYIHSANVFHRDLKPKNILANADCKIKICDFGLARVSFNEAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGRPLFPGKNVVHQLDLMTDLLGTPPAESISRIRNEKARRYLSSMRKKQPVPFTKKFPNADVTALRLLERLLAFDAKDRPTAEEALADPYFHGLANVDREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLRGGDQTSGFMYPSGVDRFKRQFAHLEDLKGKGERSTPLQRQNVSLPRERVPASNDETGKDGEQPSGSNLENTSDTPGSRSLLKSASITSKSYVKANRDPEEPIPEANDEKVAEMTEKIAVLHT 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211592g00001 489 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 22 367 - -
Stsc211592g00001 489 ProSitePatterns Protein kinases ATP-binding region signature. 29 53 IPR017441 GO:0005524
Stsc211592g00001 489 FunFam Mitogen-activated protein kinase 109 337 - -
Stsc211592g00001 489 MobiDBLite consensus disorder prediction 393 477 - -
Stsc211592g00001 489 ProSiteProfiles Protein kinase domain profile. 23 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211592g00001 489 FunFam Mitogen-activated protein kinase 338 360 - -
Stsc211592g00001 489 ProSitePatterns MAP kinase signature. 58 161 IPR003527 GO:0004707|GO:0005524|GO:0006468
Stsc211592g00001 489 Gene3D Transferase(Phosphotransferase) domain 1 109 337 - -
Stsc211592g00001 489 SUPERFAMILY Protein kinase-like (PK-like) 17 319 IPR011009 -
Stsc211592g00001 489 MobiDBLite consensus disorder prediction 460 477 - -
Stsc211592g00001 489 FunFam Mitogen-activated protein kinase 12 117 - -
Stsc211592g00001 489 MobiDBLite consensus disorder prediction 424 459 - -
Stsc211592g00001 489 Pfam Protein kinase domain 23 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211592g00001 489 CDD STKc_TDY_MAPK 22 359 - -
Stsc211592g00001 489 Gene3D Phosphorylase Kinase; domain 1 39 360 - -
Stsc211592g00001 489 SMART serkin_6 23 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211592g00001 Stsc-Chr211592 11336 15763 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211592g00001 5 489 MAP Kinase Gene Family AT1G73670 73.622 0.0 770
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Stsc211592g00001 Pkinase 1.1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211592g00001 - - gmx:100780831 806.594