Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211589g00008 ATGAAAAGTAGTAGTAGTACTAATAATAGTAGGAACAGTAGCAGGTTTCCTTTCACTCCATCACAGTGGCAAGAACTTGAACACCAAGCTTTAATATTCAAATACATGGCTTCAGGTATCACCATCCCACCTCATCTTCTCAAAAGAAGCCATTTCGATAATAATAATAATCATCATTTCTCTGCTTCAAGGATTTTGCCTCATCATCACCAACCACCACAACACCACCATTTTGGATGGAAGTATCTTCTTCAAATGGGCTTGGGAAGGAAAATGGATACAGAGCCAGGAAGGTGCAGAAGAACAGATGGGAAAAAATGGAGGTGCTCAAAGGAGGCATACCCAGATTCAAAGTACTGTGAGAGGCACATGCACCGAGGCAAAAACCATTCAAGAAAGCCTGTGGAACTTTTATTCAAAACAAATAATAATATTAATGGTTCTTCACCAACACTACCCACAATCATTTCATCATCATCACCATCCACCACTAAAACCAATCAGCAGCCTCATCAACAACATTCTAGCTACAACAATGGTTCCAATCTTTTTCATCACCATTCCTTTGTCTACAGTCACCACACTCCAGTGAGGTCATCATCTTCCACTGCTTTTTCATTTCAAGACAACACTACTACTGCTCCCTCCAGGAACAGGTATGTGCATGGAGTGAAAGAGGATGTGGATGAACGTGCTTTCTTCACAGAACCTTCTGGAACAATGAAAAGCTTCTCTGGATCCTCCTCCATTGATGATCCGTGGCAACTCACACCATTCACTATCACCTCCTCATCTTCATCCACAAAGCAGAGGAGTTGCACAACTTTATCAAACAACAGTGACTACTCATACCTGCAACTTCAGAACCTCAATGATCACTCAAAAAATCAAGAAGAACATCATCATCATCATCGTCATGAGAAGACTACTGTTCATAGCTTCTTTGATGAATGGCCCCACAAAGGCCTTGATTCCGATGACAAATCTTGTTCCTCCACAACCAAATTATCAATTTCCATTCCAACATCTTTTCATGATTTTCCCATCCTTCAATTCAAGAACCTACCCTGA 1071 0.409 MKSSSSTNNSRNSSRFPFTPSQWQELEHQALIFKYMASGITIPPHLLKRSHFDNNNNHHFSASRILPHHHQPPQHHHFGWKYLLQMGLGRKMDTEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNHSRKPVELLFKTNNNINGSSPTLPTIISSSSPSTTKTNQQPHQQHSSYNNGSNLFHHHSFVYSHHTPVRSSSSTAFSFQDNTTTAPSRNRYVHGVKEDVDERAFFTEPSGTMKSFSGSSSIDDPWQLTPFTITSSSSSTKQRSCTTLSNNSDYSYLQLQNLNDHSKNQEEHHHHHRHEKTTVHSFFDEWPHKGLDSDDKSCSSTTKLSISIPTSFHDFPILQFKNLP 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211589g00008 356 ProSiteProfiles WRC domain profile. 93 137 IPR014977 -
Stsc211589g00008 356 PANTHER GROWTH-REGULATING FACTOR 5 8 343 IPR031137 GO:0005634|GO:0006351|GO:0032502
Stsc211589g00008 356 SMART QLQ_2 16 52 IPR014978 GO:0005524|GO:0005634|GO:0006355
Stsc211589g00008 356 Pfam WRC 95 136 IPR014977 -
Stsc211589g00008 356 MobiDBLite consensus disorder prediction 142 180 - -
Stsc211589g00008 356 ProSiteProfiles QLQ domain profile. 17 52 IPR014978 GO:0005524|GO:0005634|GO:0006355
Stsc211589g00008 356 Pfam QLQ 17 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211589g00008 Stsc-Chr211589 64691 67158 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211589g00008 4 136 GRF Transcription Factor Family AT3G13960 56.296 1.35e-44 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Stsc211589g00008 WRC 1.2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211589g00008 - - aip:107630472 437.958