Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211588g00014 ATGGAACAAAAAGGAAGCGTGCTTATGCAGCGATACGAACTAGGGAAGTTGTTAGGCCAAGGAACCTTTGCGAAGGTCTACCATGCTAGGAACCTTGCAACTGGCATGAGCGTAGCCATTAAGGTAATCGACAAAGAGAAGATATTGAAAGTTGGGATGATGGAACAGATTAAGTGTGAAATTTCTGTCATGAGACTAATTCAACATCCACATGTGGTTGAGCTTTATGAAGTAATGGCCAGTAAAACCAAAATCTACTTCGTCATGGAGTATGCAAAAGGAGGTGAACTCTTCAACAAGATACTTAAAGGAAAACTCAAAGAGGATGTTGCCAGGAGATACTTTCAGCAACTGATTAGCGCAGTTGACTACTGTCACAGCCGGGGTGTGTGCCATCGAGATTTGAAACCAGAAAATCTACTGCTGGATGAAAATGAGAACTTGAAGGTTTCAGATTTTGGATTGAGTGCTCTTGCTCAATCTAAGCACCAAGATGGATTACTCCATACGACATGTGGTACACCCGCCTATGTTGCTCCGGAAGTGATAAACAGAAGGGGTTATGATGGGGTGAAAGCTGATATATGGTCGTGCGGGGTAATCTTGTTTGCTCTGTTGGCTGGTTATCTTCCATTCCAGGATAAAAATCTGATGGAGATGTATAGGAAAATCGGTAAGGCTGAATTCAAATTTCCTAAGTGGTTCGCACCTGATGTTCGCCGGTTGTTGTCCAAAATCTTGGATCCAAACCCAAGGACAAGGATATCAATGGCCAAACTCATGGAAAGTTCTTGGTTTAAAAAGGGGTTAGACAAGTCTGTGATTACTGCAACCGAAAACAAAGAACTAGCCCCTCTGGATGCCGAAGGTGTTTTTGACTCATGCGAGAACTGTCCAATTGTGAAGCCCAAGAAAGAGCAGGAAAAGCCTTCCAATTTAAATGCTTTTGATATCATCTCTTTCTCATCTGGCTTTGACTTATCTGGTTTGTTTGAGGATACCGAGCAAAAGAAAGAGGTCCGGTTCACATCTAACAAGTCCGCATCGACCATATTCTCTCAGCTGGAAGATATTTGCAAGCGCTTTCGGTTAAAACTGAAGAAGAAAGACAGAGGTTTGTTGAATCTGGAAGGTTCCAAGGAAGGCAGAAAAGGGATCTTGGGCATTGAAGCCGAGATTTTCGAGATAACCCCACAGTTCCATCTGGTAGAGTTGAGAAAGTCCAATGGCGATACAATGGAGTACAAGAAGCTTCTTAAACACGACATTCGGCCGGCACTCAAGGACATTGTCTGGACATGGCAGGGAGAACAACCACCACAACATGAAGCAGTGCCGGAAGAGCAACAGCAGCAGCCTCATGTTGTGCCTAGTTAG 1377 0.4379 MEQKGSVLMQRYELGKLLGQGTFAKVYHARNLATGMSVAIKVIDKEKILKVGMMEQIKCEISVMRLIQHPHVVELYEVMASKTKIYFVMEYAKGGELFNKILKGKLKEDVARRYFQQLISAVDYCHSRGVCHRDLKPENLLLDENENLKVSDFGLSALAQSKHQDGLLHTTCGTPAYVAPEVINRRGYDGVKADIWSCGVILFALLAGYLPFQDKNLMEMYRKIGKAEFKFPKWFAPDVRRLLSKILDPNPRTRISMAKLMESSWFKKGLDKSVITATENKELAPLDAEGVFDSCENCPIVKPKKEQEKPSNLNAFDIISFSSGFDLSGLFEDTEQKKEVRFTSNKSASTIFSQLEDICKRFRLKLKKKDRGLLNLEGSKEGRKGILGIEAEIFEITPQFHLVELRKSNGDTMEYKKLLKHDIRPALKDIVWTWQGEQPPQHEAVPEEQQQQPHVVPS 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211588g00014 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Stsc211588g00014 458 MobiDBLite consensus disorder prediction 437 458 - -
Stsc211588g00014 458 CDD STKc_SnRK3 11 265 - -
Stsc211588g00014 458 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Stsc211588g00014 458 CDD CIPK_C 314 428 - -
Stsc211588g00014 458 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Stsc211588g00014 458 Pfam NAF domain 310 368 IPR004041 GO:0007165
Stsc211588g00014 458 MobiDBLite consensus disorder prediction 444 458 - -
Stsc211588g00014 458 Gene3D Transferase(Phosphotransferase) domain 1 92 272 - -
Stsc211588g00014 458 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 428 - -
Stsc211588g00014 458 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211588g00014 458 FunFam Non-specific serine/threonine protein kinase 308 432 - -
Stsc211588g00014 458 Gene3D Kinase associated domain 1, KA1 307 433 - -
Stsc211588g00014 458 ProSiteProfiles NAF domain profile. 308 332 IPR018451 GO:0007165
Stsc211588g00014 458 SUPERFAMILY Protein kinase-like (PK-like) 8 280 IPR011009 -
Stsc211588g00014 458 Gene3D Phosphorylase Kinase; domain 1 2 91 - -
Stsc211588g00014 458 FunFam Non-specific serine/threonine protein kinase 2 289 - -
Stsc211588g00014 458 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211588g00014 458 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211588g00014 Stsc-Chr211588 74824 77943 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211588g00014 1 438 CBL-interacting serine-threonine protein kinases AT5G58380 65.563 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Stsc211588g00014 Pkinase 1.3e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211588g00014 K07198 - gmx:100811923 718.768