Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211588g00008 ATGAGCCTTATAGGATTAGGATCAGGTCAATTGTCATCAAATTTTTATGCAACAACATGTCCGAATGCACTTTCAACGATTAGGTCAGGAGTGAACTCTGCTGTGAGCAAAGAAGCTCGCATGGGAGCTTCCCTTCTTCGCCTTCATTTCCATGATTGCTTTGTTCAAGCAAGAGAAAAAACAGCACGTCCTAATGCTAATTCAATTAGAGGTTTTGAAGTCATAGACACCATAAAATCTCAAGTAGAGAGCTTGTGTCCTGGTGTTGTTTCTTGTGCTGATATTCTTGCTGTTGCTGCTAGAGATTCTGTTGTTGCTCTTGGTGGACCCAGTTGGACAGTGCAACTGGGAAGAAGAGACTCAACTACAGCAAGTTTAAGCTTAGCTAACTCAGATTTGCCTGCTCCCACTTTGGATCTCAGTGGTCTAATCTCTGCTTTCTCTAAGAAAGGTTTATCAACTAGTGAAATGGTTGCCCTATCAGGAGGGCATACAATTGGGCAAGCAAGATGCACAAGCTTTAGAACAAGGATATACACTGAGAGCAACATAGATCCCAATTTTGCAAAATCATTGCAAGGAAATTGCCCTAATACCACAGGCAATGGTGACAACAACTTGGCCCCAATTGACACAACTAGTCCAACAAGGTTTGACAATGGTTACTATAAGAACTTGCTAGTGAAAAAGGGTCTCTTCCACTCTGATCAACAACTCTTCAATGGAGGATCCACAGATTCTCAAGTGAATGGTTATGCCTCCAACCCTTCAAGTTTCTGCTCTGATTTTGGCAATGCTATGATTAAGATGGGTAACATTAGTCCACTCACTGGATCCAGTGGCCAGATTAGGACCAATTGCAGGAAGACCAATTAG 876 0.4224 MSLIGLGSGQLSSNFYATTCPNALSTIRSGVNSAVSKEARMGASLLRLHFHDCFVQAREKTARPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGPSWTVQLGRRDSTTASLSLANSDLPAPTLDLSGLISAFSKKGLSTSEMVALSGGHTIGQARCTSFRTRIYTESNIDPNFAKSLQGNCPNTTGNGDNNLAPIDTTSPTRFDNGYYKNLLVKKGLFHSDQQLFNGGSTDSQVNGYASNPSSFCSDFGNAMIKMGNISPLTGSSGQIRTNCRKTN 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211588g00008 291 PRINTS Haem peroxidase superfamily signature 156 171 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc211588g00008 291 PRINTS Haem peroxidase superfamily signature 211 226 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc211588g00008 291 PRINTS Haem peroxidase superfamily signature 90 107 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc211588g00008 291 PRINTS Haem peroxidase superfamily signature 108 120 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc211588g00008 291 PRINTS Haem peroxidase superfamily signature 42 56 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc211588g00008 291 Gene3D - 14 291 - -
Stsc211588g00008 291 PANTHER PEROXIDASE 72-RELATED 10 289 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc211588g00008 291 ProSitePatterns Peroxidases proximal heme-ligand signature. 156 166 IPR019793 -
Stsc211588g00008 291 Gene3D Peroxidase, domain 2 134 270 - -
Stsc211588g00008 291 FunFam Peroxidase 134 270 - -
Stsc211588g00008 291 ProSiteProfiles Plant heme peroxidase family profile. 10 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc211588g00008 291 SUPERFAMILY Heme-dependent peroxidases 10 291 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc211588g00008 291 PRINTS Plant peroxidase signature 44 64 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc211588g00008 291 PRINTS Plant peroxidase signature 265 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc211588g00008 291 PRINTS Plant peroxidase signature 20 39 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc211588g00008 291 PRINTS Plant peroxidase signature 225 242 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc211588g00008 291 PRINTS Plant peroxidase signature 209 224 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc211588g00008 291 PRINTS Plant peroxidase signature 155 167 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc211588g00008 291 PRINTS Plant peroxidase signature 108 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc211588g00008 291 Pfam Peroxidase 28 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc211588g00008 291 CDD secretory_peroxidase 10 290 IPR033905 GO:0004601|GO:0042744
Stsc211588g00008 291 ProSitePatterns Peroxidases active site signature. 42 53 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211588g00008 Stsc-Chr211588 35153 38795 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211588g00008 9 291 Peroxidase AT5G05340 63.636 5.37e-136 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211588g00008 K00430 - gmx:100815142 446.817