Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211587g00015 ATGACTACCATCCGCCGCTTTTGCTGCAACGATCTCCTTCGCTTTGCCTCCGTCAACCTCGACCATCTCACTGAGACCTTCAATATGTCTTTCTACATGACCTATCTAGCCAGATGGCCCGACTATTTTCACGTTGCCGAAGGCCCCGGAAACAGAATCATGGGTTACATTATGGGTAAAGTAGAGGGGCAAGGAGAATCTTGGCATGGGCATGTCACTGCAGTAACCGTTGCTCCCGAGTATCGGCGGCAGCAATTAGCCAAGAAACTGATGAATTTGCTAGAAGACATCAGCGACAACATTGACAAGGCTTACTTTGTTGATCTTTTTGTGAGAGCGTCTAATGCTCCAGCAATCAAGATGTATGAAAAGCTTGGCTATGTGATTTATCGACGAGTGCTACGTTACTATTCTGGGGAAGAAGATGGATTAGATATGCGGAAGGCATTGTCTCGTGATGTTGAAAAGAAATCAATCATTCCTCTTAAACGACCTATCACTCCGGATGAATTAGAGTATGATTAA 525 0.4495 MTTIRRFCCNDLLRFASVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVAPEYRRQQLAKKLMNLLEDISDNIDKAYFVDLFVRASNAPAIKMYEKLGYVIYRRVLRYYSGEEDGLDMRKALSRDVEKKSIIPLKRPITPDELEYD 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211587g00015 174 PANTHER N-ALPHA-ACETYLTRANSFERASE 20 1 171 - -
Stsc211587g00015 174 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 151 IPR000182 GO:0016747
Stsc211587g00015 174 CDD NAT_SF 45 97 - -
Stsc211587g00015 174 Pfam Acetyltransferase (GNAT) family 39 127 IPR000182 GO:0016747
Stsc211587g00015 174 FunFam N-alpha-acetyltransferase 20 2 161 - -
Stsc211587g00015 174 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 150 IPR016181 -
Stsc211587g00015 174 Gene3D - 2 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211587g00015 Stsc-Chr211587 64509 66867 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc211587g00015 Acetyltransf_1 8.2e-15 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211587g00015 K17972 - gmx:100306394 355.91