Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211586g00010 ATGTCCAACACACGCTCCCCGACGCGTTCCTCCGAGGACATCGTCGATACCACGCCGTTTCTCGGCAACACTAGCGCCACCGCCGCTGCCACCGACGATTTCAATTCAGGACGCCGATTCGTACGGCGGCAGAGCCTCCGACAGGCGGCGAGGTTCCTCCGGCAGGCCAGCGGGAGGAGGATGATGCGAGAGCCGTCCATGGTGGTGCGGGAGACGGCGGCGGAGCAATTGGAGGAGAGGCAGAGCGATTGGGCGTATTCGAAGCCTGTGGTGATCCTTGACATGATTTGGAACTTCGCGTTCGTGGTGGTGGCGGCGACGGTGATGGTTCTGAGCAGGAAAGAAGNNNNNNNNNNGTGGATTGTAGGGTACGCTATGCAGTGCGTGCTTCACATGATTTGTGTTTGCGTTGAGTACAGGAGGAGGAGGAGGATCCAGCGCTCGCAGTCTCTGAATGGTAGTGGAGAAGAAAGGGTTGGAAGCAGTGGGAATTTGAGTACACCTTCGAGAGAGGGTTCTTCACAGTATGTCACATTGGGCCAGGTGGATGAGGACAGCACTAGTGTTGCAAAGCATTTGGAATCAGCAAATACAATGTTTTCTTTTATTTGGTGGATTATTGGGTTCTACTGGGTATCAGCTGGTAGTCAATCTTTAGCTGAAGAATCTCCTCTGCTTTACTGGCTATGTATAATCTTCCTTGGTTTTGATGTCTTCTTTGTTGTATTCTGTGTTGCACTGGCATGTATCATTGGTATTGCTGTTTGCTGTTGTCTTCCATGCATCATTGCCCTTCTTTATGCAGTTGCAGACCAGCAGGAAGGAGCATCAAAAGAGGATATTGAGCAGTTGTCAAAGTATAAATTTCGAAAAGTTGAAAACAACGAGAAACTTGCTGGAAATGCACAAGGACCTGTTGGAGGAATAATGACTGAATGCCGATCTGACTCACCTAGTGAACATGTTCTTGCCGAGGAGGACGCGGAATGTTGCATCTGCCTTTCTTCCTATGACGATGGGGTTGAACTAAGACAACTTCCTTGTGGTCACCATTTTCACTGCTCCTGCATTGATAAATGGCTGTATATTAATGCCACTTGCCCACTCTGCAAGTATAACATCTTGAAAAGTAGCAACCTTGGTCAAGAGGAAGTGTAG 1158 0.4896 MSNTRSPTRSSEDIVDTTPFLGNTSATAAATDDFNSGRRFVRRQSLRQAARFLRQASGRRMMREPSMVVRETAAEQLEERQSDWAYSKPVVILDMIWNFAFVVVAATVMVLSRKEXXXXWIVGYAMQCVLHMICVCVEYRRRRRIQRSQSLNGSGEERVGSSGNLSTPSREGSSQYVTLGQVDEDSTSVAKHLESANTMFSFIWWIIGFYWVSAGSQSLAEESPLLYWLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVADQQEGASKEDIEQLSKYKFRKVENNEKLAGNAQGPVGGIMTECRSDSPSEHVLAEEDAECCICLSSYDDGVELRQLPCGHHFHCSCIDKWLYINATCPLCKYNILKSSNLGQEEV 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211586g00010 385 PANTHER TARGET OF ERK KINASE MPK-1 56 376 - -
Stsc211586g00010 385 ProSiteProfiles Zinc finger RING-type profile. 330 371 IPR001841 -
Stsc211586g00010 385 SUPERFAMILY RING/U-box 321 377 - -
Stsc211586g00010 385 SMART ring_2 330 370 IPR001841 -
Stsc211586g00010 385 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 315 383 IPR013083 -
Stsc211586g00010 385 CDD RING-H2_RNF6-like 329 371 - -
Stsc211586g00010 385 MobiDBLite consensus disorder prediction 153 173 - -
Stsc211586g00010 385 FunFam E3 ubiquitin-protein ligase At1g12760 316 381 - -
Stsc211586g00010 385 Pfam Ring finger domain 329 371 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211586g00010 Stsc-Chr211586 84725 88517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211586g00010 25 378 C3H Transcription Factor Family AT1G68070 47.645 1.05e-110 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211586g00010 - - gmx:100800429 572.392