Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211586g00005 ATGAGCACGCAGAGATTGGACTTGCCAGCTTCAGCTTGCACCTTTCCAAGGAACAACAAAGTCTCACCAAGGCCTTCTGTTGTCACCGCCAACACCAACACCAACAACAAGCCCATTGAAGCCAAGACAAGCTCTTACTCTCTCAAACAGCACATTAGGCTTCCCCCATTGGCAACCACACCACAAGTCATCACATCTGCACCACCTTCACCCTTCCTTGAAGCCAAAGACGAGCCCTTCTGGGACACCAACAACAGGAGCTTGAAGAAGAGGCCAGTGGATGCTGACGATTCCTTTGATAGCAGAGCCAAGAGGAAGAAGGGTAGCAACAGCACCAGCGACAATGGCGATTCTTCCGATGATGTTATGGAAGAAGAAGATGGACACAGGATAACAGGAGAGGCTCTGAGTTTATCTGCAAACTTCTGGTTACAGCCATCTTCACTTCCTCCATTCTCACTAACATGTTCAGGGGAGGAAGAGAGGGTGTGCTTCGTTCCAAGTGAAGTGGTTTCCGCTCCTTGGACGGAATCCGCAATAACAAAGATCACAAACCATGGCGAGAAGGAAGGCGAGGGTGGTGGCAGCCGCTTCCCGCCGCCACAACCCTCAGCCTCCTCCAACACCTCATCAGAGAGCCAAGGTTTAAGCCTCAGGCTGAACGAGAATCCTGAAGTCGGAAACGGTTCAGGTAACCCTTACCATAACCACCACCACCACCATGAAGAAACCACCGCGGAGGAAGACGAAGATATCCAAGAGGAGCACCGTGGATTCGAGCTTGTTAGTTTACTGACCGCATGCGTTGAAGCCATTGGAGCAAAGAACATCGCCGCAATCAACCATTTCATAGCGAAATTAGGAGATCTTGCTTCACCAAGAGGAACGAGTTCAATGAGCCGAATCTGTTCTTACTTCACAGAAGCCCTAGCCATAAGAGTGACGAGGCTATGGCCTCAGATTTTCCACATCACCATCCCTCGCGAGCTCGATCGTGTTGTGGAAGACGAAAACGGCACCGCATTGAGGCTCTTGAATCAAATCACACCGATCCCTAAGTTCCTTCACTTCACATCGAATGAAATGCTGCTGAGAGCCTTCGAAGGCAAAGACAGAGTCCACATCATCGATTTCGACATCAAGCAAGGTCTTCAATGGCCGAGCTTGTTCCAGAGCTTGGCTTCCAGATCCAATCCTCCCAGCCACGTCAGAATCACCGGGATCGGCGAATCCAAGCAAGATTTGAACGAAACAGGTGACAGGCTCGCCGGTTTCGCGGAGGCGCTGAACCTTCCGTTCGAGTTCCATGGAGTGGTGGACAGGCTGGAAGACGTGAGGCTGTGGATGCTTCACGTGAAGGAGAACGAAACCGTTGCGGTGAACTGCGTGTTCCAGCTTCACAAGACTCTGTACGACGTAAATGGCGGAGCGTTGAGAGATTTCTTGGGACTGATACGAAGCACGAACCCTGCAATGGTGGTTGTGGCAGAGCAAGAAGCAGAGCACAACGATATGAGGTTGGAGGCTAGGGTTTGTAACTCGTTGAAATACTACTCAGCGTTGTTTGACTCGGTTGAGCACTGTCTTGAAGGGGATAGCAGCGCGAGGAGGAAGATAGAGGAGATGTTTGGGAGGGAGATAAGGAACATTGTGGCTTGTGAAGGGAGTGATAGATTGGAGAGGCATGAGGGTTTTGGCAAGTGGAGGAAGATGATGGTGGATCAAGGAGGGTTCAGATGCTTGGGTGTTACTGATAGAGAAAGGGTTCAGAGCCAGTTGCTAATGAAGATGTACCCTTGTGACAGTTACACTGTGAGGACTCATCGTTTAACTGATGAGGCACTCAGTCTTTGTTGGATGGATATTCCTCTCTTCACTGTTTCAGCTTGGGCACCTCTTGATGGAGGAACTTCTTCATCTGTTTCTCATCCGATTTGA 1938 0.5026 MSTQRLDLPASACTFPRNNKVSPRPSVVTANTNTNNKPIEAKTSSYSLKQHIRLPPLATTPQVITSAPPSPFLEAKDEPFWDTNNRSLKKRPVDADDSFDSRAKRKKGSNSTSDNGDSSDDVMEEEDGHRITGEALSLSANFWLQPSSLPPFSLTCSGEEERVCFVPSEVVSAPWTESAITKITNHGEKEGEGGGSRFPPPQPSASSNTSSESQGLSLRLNENPEVGNGSGNPYHNHHHHHEETTAEEDEDIQEEHRGFELVSLLTACVEAIGAKNIAAINHFIAKLGDLASPRGTSSMSRICSYFTEALAIRVTRLWPQIFHITIPRELDRVVEDENGTALRLLNQITPIPKFLHFTSNEMLLRAFEGKDRVHIIDFDIKQGLQWPSLFQSLASRSNPPSHVRITGIGESKQDLNETGDRLAGFAEALNLPFEFHGVVDRLEDVRLWMLHVKENETVAVNCVFQLHKTLYDVNGGALRDFLGLIRSTNPAMVVVAEQEAEHNDMRLEARVCNSLKYYSALFDSVEHCLEGDSSARRKIEEMFGREIRNIVACEGSDRLERHEGFGKWRKMMVDQGGFRCLGVTDRERVQSQLLMKMYPCDSYTVRTHRLTDEALSLCWMDIPLFTVSAWAPLDGGTSSSVSHPI 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211586g00005 645 MobiDBLite consensus disorder prediction 186 254 - -
Stsc211586g00005 645 ProSiteProfiles GRAS family profile. 252 631 IPR005202 -
Stsc211586g00005 645 MobiDBLite consensus disorder prediction 79 111 - -
Stsc211586g00005 645 Pfam GRAS domain family 261 630 IPR005202 -
Stsc211586g00005 645 MobiDBLite consensus disorder prediction 200 230 - -
Stsc211586g00005 645 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 214 626 IPR005202 -
Stsc211586g00005 645 MobiDBLite consensus disorder prediction 1 128 - -
Stsc211586g00005 645 MobiDBLite consensus disorder prediction 1 50 - -
Stsc211586g00005 645 MobiDBLite consensus disorder prediction 235 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211586g00005 Stsc-Chr211586 49515 51452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211586g00005 1 630 GRAS Transcription Factor Family AT1G63100 54.940 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc211586g00005 GRAS 1.8e-125 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211586g00005 - - lang:109333178 788.104