Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211585g00011 ATGGATACGTTGTTTAGAGTGGTGAGTTTTCAACAATACCAACAACAGCAACAAGTTGAATTAGATCAGTCCCTCAACTCCACCACCACCACAACCACTACTTCCAGCAGCTCTAGATCCTCCCGACACAATTATCATCACTACCACCAACAGCAACAAGACGAAGAATGCTTCAACTTTTTCATGGATGAAGAAGACCTCTCCTCGTCTTCTTCCAAGCACCACTACTATCCCTATCACCATCCCCACTCTTCCACTTCCACTACCACTACCCCCACCACCATCCTCACCCCCACCCCGCCCACCACCACCGACTTCTCCTACTCTCTCTCCTCCCCCACCCGCGACTTCAACTTCGATTTCTCCTCAAACGCAAAGTGGGCGCACGACCTCCTTCTCCACACGGCGCGTGCTCTTGCCGACAAGAACACCGCGCGTCTTCAGCAGCTCATGTGGATGCTCAACGAGCTCAGCTCCCCTTATGGCGATACCGAACAGAAGCTAGCCGCTTACTTCCTTCAAGCGCTCTTCAGCCGCATGACTCATGCCGGTGATCGAACCTTCCGGACATTAACCACCGCCTCTGATAAGACTTGCTCCTTCGAATCAACCAGAAAGACGGTGCTCAAGTTCCAAGAGGTGTCCCCATGGACGACCTTCGGACACGTGGCAGCCAATGGCGCAATCTTGGAGGCTTTGGAGGGTGAAGCAAAGTTGCATATAGTTGATATTAGCAACACTTATTGCACCCAATGGCCGACGCTGTTTGAAGCCTTGGCAACTCGCTCCGACGACACGCCGCACCTCAGGATCACCACCATCGTCGTCACAACTGCTCACGGCGGATCTGTCCCGGCGGCGCAGAGGGTCATGAAGGAGATAGGTGCCAGGATGGAGAAGTTCGCCAGGCTCATGGGAGTTCCGTTCAAGTTCAACGTCGTTCACCATTCCGGTGATCTCTCCGAGTTCGATTTCGNNNNNNNNNNGGAATTGGACATCAGGGACGACGAGGCGTTAGCTGTTAACTGCGTCAACACGTTGCACTCGATCGCCGCGGTGGGGAACCGCCGCGACGCGGTGATATCGTCTTTGAGAAGGCTTCAGCCGAGGATCGTGACGGTGGTTGAGGAAGAAGCCGATTTGGACGTTGGCTTGGAAGGATTGGAGTTCGTGAAAGGGTTCCAAGAATGCTTGAGGTGGTTTAGGGTTTACTTTGAGGCGCTGGAGGATAGTTTTCCAAGGACGAGTAACGAGAGGCTGATGCTGGAGAGGGCGGCGGGGAGGGCGATGGTGGACTTGGTGGCGTGTTCGGCTGAGGAATCGTCGGAGAGGAGGGAGACGGCGGGGAGATGGTCGCAGAGGATGCATGGATCGGGGTTCAATGCGGCGTCGTTTAGCGAGGAAGTTAGCGATGATGTAAGGGCGCTGCTTCGGAGGTACAAGGAAGGATGGTCAATGGCACAGTGCCCGGATCACGGCGGAATGATGCTGTGGTGGAAGGAGCAGGCGGTGGTGTGGGCCAGTGCATGGAGGCCCAGCTTCACGTAG 1548 0.5484 MDTLFRVVSFQQYQQQQQVELDQSLNSTTTTTTTSSSSRSSRHNYHHYHQQQQDEECFNFFMDEEDLSSSSSKHHYYPYHHPHSSTSTTTTPTTILTPTPPTTTDFSYSLSSPTRDFNFDFSSNAKWAHDLLLHTARALADKNTARLQQLMWMLNELSSPYGDTEQKLAAYFLQALFSRMTHAGDRTFRTLTTASDKTCSFESTRKTVLKFQEVSPWTTFGHVAANGAILEALEGEAKLHIVDISNTYCTQWPTLFEALATRSDDTPHLRITTIVVTTAHGGSVPAAQRVMKEIGARMEKFARLMGVPFKFNVVHHSGDLSEFDFXXXXELDIRDDEALAVNCVNTLHSIAAVGNRRDAVISSLRRLQPRIVTVVEEEADLDVGLEGLEFVKGFQECLRWFRVYFEALEDSFPRTSNERLMLERAAGRAMVDLVACSAEESSERRETAGRWSQRMHGSGFNAASFSEEVSDDVRALLRRYKEGWSMAQCPDHGGMMLWWKEQAVVWASAWRPSFT 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211585g00011 515 Pfam GRAS domain family 130 511 IPR005202 -
Stsc211585g00011 515 MobiDBLite consensus disorder prediction 24 41 - -
Stsc211585g00011 515 MobiDBLite consensus disorder prediction 81 100 - -
Stsc211585g00011 515 MobiDBLite consensus disorder prediction 24 49 - -
Stsc211585g00011 515 ProSiteProfiles GRAS family profile. 119 511 IPR005202 -
Stsc211585g00011 515 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 91 503 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211585g00011 Stsc-Chr211585 67351 69545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211585g00011 1 513 GRAS Transcription Factor Family AT4G37650 63.265 0.0 621
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc211585g00011 GRAS 8.3e-106 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211585g00011 - - qsa:O6P43_033912 663.685