Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211585g00006 ATGGCAAGGTCTGTCACTACCACATCCTTTTCTTTGTCAAGTCTAATGTGTGAAGAAGAAGGTCAAGCTTGCTTCTTTCAAGACAACAACTTTGATGATGATGATGAACTTCAACTTGTTGAATCTTCCTCTTTTGTTTTTGAAGAGGAAGATGAAGAGGAATACATTGAGTATTTGTTCAGCCAAGAAACTGCTTTTGGATCCCACAATCATGATGATTTCTCAGCCACCAGATTCTGGTTGAGGACTGCTCGTTTCAATGCCATTGATTGGATTTTCAATACACAGGCAAAACTTGGATTCAAAGTTCACACAGCTTATTTATCAGTCTCCTACTTTGATCGGTTTCTTTCAAAAAGATCCATCGATGAATCAAAACCTTGGGCTATTCAATTGTTATCGGTGGCTTGTTTATCCCTTGCAGCAAAAATGGAAGAACAATATGTGCCTGCTCTCTCTGAATATCCAATAGTTGAATACAGGTTTGAGAGCAAAGTGATTAAGAACATGGAGCTTCTGATTCTTGCTACCTTGGATTGGAAAATGGGATCATCACCAACTCCTTTCTCTTATCTCCATTACTTTCTCACCAAGTTCTTCCCTGGATCCAATTCAGCTAACACAATTATCGCAAAAGCCACCCAACACATTGTAGCCATGGTCAAAGATGTTAATTTGATGGATCAACGGCCATCTATAATAGCCTTGGCTGCAATATTGGCAGCGGTTGATGCTACGTTAACAAGAAAGGCCATGGATCTTAGGATAAGAGAAATCTCATCTTGGGGCAATCTAGAAAGTGGAGATGTATTTTCCTGTTACAATCTTATACAGGAGAAGAGAAGGAGCAAAGTTAAGACCCCTTGCTCGAATTTAATGTCAAACCAATCCAACTCCACGTGTGTTCTTGAGAATCAATCTGACACCACTTGTTCAGGAGTTAAGAGAAAACTCTCTTTTCAGGACACTGATGAGGAAACTGAAAACTACAAGAAGCTAAATCGTCACTAG 1011 0.3956 MARSVTTTSFSLSSLMCEEEGQACFFQDNNFDDDDELQLVESSSFVFEEEDEEEYIEYLFSQETAFGSHNHDDFSATRFWLRTARFNAIDWIFNTQAKLGFKVHTAYLSVSYFDRFLSKRSIDESKPWAIQLLSVACLSLAAKMEEQYVPALSEYPIVEYRFESKVIKNMELLILATLDWKMGSSPTPFSYLHYFLTKFFPGSNSANTIIAKATQHIVAMVKDVNLMDQRPSIIALAAILAAVDATLTRKAMDLRIREISSWGNLESGDVFSCYNLIQEKRRSKVKTPCSNLMSNQSNSTCVLENQSDTTCSGVKRKLSFQDTDEETENYKKLNRH 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211585g00006 336 Gene3D - 185 251 - -
Stsc211585g00006 336 FunFam Cyclin-D5-1 80 183 - -
Stsc211585g00006 336 Gene3D - 83 184 - -
Stsc211585g00006 336 CDD CYCLIN_AtCycD-like_rpt1 84 180 - -
Stsc211585g00006 336 SUPERFAMILY Cyclin-like 45 182 IPR036915 -
Stsc211585g00006 336 SMART Cyclin_C_2 186 321 IPR004367 -
Stsc211585g00006 336 Pfam Cyclin, C-terminal domain 186 291 IPR004367 -
Stsc211585g00006 336 ProSitePatterns Cyclins signature. 85 116 IPR006671 -
Stsc211585g00006 336 SMART cyclin_7 90 176 IPR013763 -
Stsc211585g00006 336 Pfam Cyclin, N-terminal domain 56 182 IPR006671 -
Stsc211585g00006 336 PANTHER CYCLINS 41 286 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211585g00006 Stsc-Chr211585 33939 35292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211585g00006 85 267 Core Cell Cycle Gene Families AT4G37630 41.451 5.75e-40 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211585g00006 K18811 - gmx:100798140 429.098