Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211585g00004 ATGAAATTCAATTTCAAACTACATAACTCTAACTCTCTCTTCTTTATTATCATAATCTCACTTTTGTCCATATTATCCATCGCTAAACCCCTCAATGAATCCCACATTACAAGAAGGATCCTACACCAGCCACTTTTCCCCGCCGCTTCAGTACCGCCACCTGCGCCGGCTCAATTGCCACCGCCGGTGGAGACTCCACCATCTCCGGACACCAACATTCCCTTCTTCCACGAGTATCCGGCTGGACCACCACCGGATCAACCGCAATCACCGCCATCAGCAACTGCCAACAGCACCATCGCCAACCCGACGGCGACGCAACCGACCAAGGGGACAAAGAAGGTGGCAATTGCCATCTCCGTCGGAATCGTGACGCTTGGGATGCTCTCGGCGCTCGCGTTCTTCCTGTACAAGCACAGGGCCAAGCACCCTGTGGAGACACAGAAGCTTGTCGGTGGAAACTCACAGAGGAATATGGATGATTCGAGAGCGCAACCGCCATCGAGCTTTCTCTACATTGGGACCGTGGAACCCACGCGCACCTCCGCGAGTGAACCAATCAGGTCGCCGTATCACAAACTCAATTCCGTTAAGCGGTCTGATCGGTACCGTCCAAGCCCCGAGCTGCAGCCATTGCCGCCTCTCACTAAGCCTCCAGATGGGAATTTCCCACCGGCGGTGTCGCCGTCTTCGTCCTCCGACGAGGAGAGCCACGACACGGTGTTTCACTCGCCGCAGAACTCGTCGGTTAGAGATGACGACGGGTACTTCACACCGGTTTCGCGACATAGTTATCTTTCCAATGGTAGCCCCGCGACGGTGGCGCCGGTAAGGAGGGAAGCCAATTCTTCTACGCCGACATCAGTTCCGTTCTCGAAGAGGACTTCACCAAAGTCTCGGTTATCTGCTCCGTCGCCGGATGTAAGACACGTCATCATACCGCCTATGAAGAAGGCTCCGCCGCCACCGGTAAAGGATGAAGAAGAGCATGTGGCTTTGGGACATTCTAGAAGGCCAAAGTTCTCAGCTCCTCCTCCACCACCGAATTTGACGCATCTTCGGTCAACTCTCACAAAAACACCCCCGCACGTGACCGGGAATCCACTTAATCATCGTCCTCCACCACCACCACCACCTCCTCCTCCTCCGCCTCCTCCGCTACCACCACGTAAAACAGGATCTCCAGGAGTCAGCGTTTCCTCATGTTCTGTATCAAGAAAGCAACAGTCTCGTTCTCCAACTGAAGAGGTTTCAAATTCTGGTGTTAGTGTGAGTAATGGAGATGGCGAGAAAAGTGTGAGCTCTTCCGAGAGGCATGAAGCCAATGAAACGGATGGAGTGAAACCCAAGTTAAAAGCTTTGCATTGGGATAAGGTCCGTGCTTCCTCAGATCACGTTACTGTGTGGGACCAATTAAAATCAAGTTCCTTCCAATTGAATGAGGACATGATGGAGTCTTTGTTTGGTTGTAATGCCACTAGCTCTGCTCCTAAGGAACCTCCCAAGAAAACGCTTCTTCCTTCTTCCATTGATCATCAGAACAGGGTCCTTGACCCCAAGAAGTCTCAGAACATAGCTATACTACTCAGGGCACTTAATGTCACCAGGGATGAGGTCTCCGAAGCTCTTTTAGATGGAAATCCTGAAGGTTTGGGTGCTGAGCTATTGGAAACACTAGTAAAGATGGCTCCTACTAAAGAGGAAGAGATAAAACTAAAAAACTACAATGGTGACCTCTCAAAACTTGGGTCAGCGGAAAGGTTTCTTAAAGCTGTGCTTGATATCCNNNNNNNNNNCAGGGCCAACTTTGATTCAGAAGTCAACTATCTCAGAAAGTCTTTTCAAACCCTGGAGGCAGCAAGTGAGGAATTAAGGAACAGCCGGTTATTCCTCAAACTCCTTGAAGCTGTTCTCAGGACAGGAAACAGAATGAATGTTGGTACCAACAGAGGCGATGCCAAAGCTTTTAAACTTGACACACTCCTAAAACTTGTAGATATAAAGGGAACAGATGGAAAGACCACATTGCTTCACTTTGTGGTCCAGGAGATTATTAGATCTGAAGATGCAGGAGGGGAATCCGCTAATGGTAGTGTTCAGAACCAAATGAATTCCAAATTTAATGAGGATGAGTTTAAGAAGCAAGGATTACAAGTTGTGGCTGGGCTGAGTAGAGACCTTAGTAATGTTAAAAAAGCAGCAGGAATGGATTCAGATGTCTTAAGCAGCTATGTTTCGAAGCTCGAAACTGGGCTCGATAAAGTGCGACTGGTATTGCAATACGAGAAGCCAGATACGCAAGTGAATTTCTTCAACTCCACGAAGCAATTTCTGAAATATGCTGAAGAAGAAATCACGAGGATTAAGGCTGATGAGAAAAAGGCTTTGTTCCTTGTGAAAGAAGTAACAGAATACTTCCATGGGAATGCAGCAAAAGAAGAGGCCCACCCTTTAAGAATCTTTATGATTGTAAGAGACTTCCTAAATATTCTAGACCTGGTGTGCAAGGAAGTGGGAAGGATGCATGACAGAATTGTCGGCTCGGCGAGATCATTCCGCATGGCCGCGACTGCACCATTACCTGTTCTCAACAGGTACAATGCAAAGCAGGACACAAGCTCGGACGAGGAAAGCTCATCCCTCTAG 2646 0.4853 MKFNFKLHNSNSLFFIIIISLLSILSIAKPLNESHITRRILHQPLFPAASVPPPAPAQLPPPVETPPSPDTNIPFFHEYPAGPPPDQPQSPPSATANSTIANPTATQPTKGTKKVAIAISVGIVTLGMLSALAFFLYKHRAKHPVETQKLVGGNSQRNMDDSRAQPPSSFLYIGTVEPTRTSASEPIRSPYHKLNSVKRSDRYRPSPELQPLPPLTKPPDGNFPPAVSPSSSSDEESHDTVFHSPQNSSVRDDDGYFTPVSRHSYLSNGSPATVAPVRREANSSTPTSVPFSKRTSPKSRLSAPSPDVRHVIIPPMKKAPPPPVKDEEEHVALGHSRRPKFSAPPPPPNLTHLRSTLTKTPPHVTGNPLNHRPPPPPPPPPPPPPPLPPRKTGSPGVSVSSCSVSRKQQSRSPTEEVSNSGVSVSNGDGEKSVSSSERHEANETDGVKPKLKALHWDKVRASSDHVTVWDQLKSSSFQLNEDMMESLFGCNATSSAPKEPPKKTLLPSSIDHQNRVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPEGLGAELLETLVKMAPTKEEEIKLKNYNGDLSKLGSAERFLKAVLDIXXXXRANFDSEVNYLRKSFQTLEAASEELRNSRLFLKLLEAVLRTGNRMNVGTNRGDAKAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEDAGGESANGSVQNQMNSKFNEDEFKKQGLQVVAGLSRDLSNVKKAAGMDSDVLSSYVSKLETGLDKVRLVLQYEKPDTQVNFFNSTKQFLKYAEEEITRIKADEKKALFLVKEVTEYFHGNAAKEEAHPLRIFMIVRDFLNILDLVCKEVGRMHDRIVGSARSFRMAATAPLPVLNRYNAKQDTSSDEESSSL 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211585g00004 881 PANTHER FORMIN-RELATED 15 875 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Stsc211585g00004 881 SUPERFAMILY Formin homology 2 domain (FH2 domain) 376 842 - -
Stsc211585g00004 881 SMART it6_source 441 846 IPR015425 -
Stsc211585g00004 881 ProSiteProfiles Formin homology-2 (FH2) domain profile. 441 857 IPR015425 -
Stsc211585g00004 881 MobiDBLite consensus disorder prediction 321 336 - -
Stsc211585g00004 881 MobiDBLite consensus disorder prediction 149 189 - -
Stsc211585g00004 881 MobiDBLite consensus disorder prediction 51 108 - -
Stsc211585g00004 881 MobiDBLite consensus disorder prediction 432 449 - -
Stsc211585g00004 881 MobiDBLite consensus disorder prediction 394 431 - -
Stsc211585g00004 881 MobiDBLite consensus disorder prediction 261 302 - -
Stsc211585g00004 881 MobiDBLite consensus disorder prediction 148 449 - -
Stsc211585g00004 881 MobiDBLite consensus disorder prediction 490 509 - -
Stsc211585g00004 881 MobiDBLite consensus disorder prediction 367 392 - -
Stsc211585g00004 881 MobiDBLite consensus disorder prediction 207 225 - -
Stsc211585g00004 881 Pfam Formin Homology 2 Domain 444 831 IPR015425 -
Stsc211585g00004 881 MobiDBLite consensus disorder prediction 51 69 - -
Stsc211585g00004 881 MobiDBLite consensus disorder prediction 92 108 - -
Stsc211585g00004 881 Gene3D Formin, FH2 domain 448 858 IPR042201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211585g00004 Stsc-Chr211585 20157 24771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211585g00004 392 871 FH2 protein (formin) Gene Family AT5G67470 67.068 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211585g00004 - - adu:107487660 1305.43