Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211584g00005 ATGTGCAGGGGTGATGTACCCTTTGATGTTTGTGGAGATTGTGTTCAATCTGCAACACATGTACTCTCTTCAGAGTGCACCTTATCCCTTTGGGGAATGATCTGGTATGAACAATGCATGGTTCGATATTCCAACACTTGTTTCTTCTCTGTTCCTTCAACACAACCTTCCAATCCCATGTCCAACAATTTCAATGTTTCCACCAACCAAACCATGTTTGACTCTCTGCTTCTCAACACCATGAACAAAACTGCAGATGAAGCTGCCTTTTCTCTCAACAAATATGCCACAAAAGAACAGAAGCTAACAGAGCTTCTAACGATCTTTAATCTAGCTCAGTGCACCCGAGATCTCTCGTTCCAAGCTTGTAGAACGTGTCTTGGATTCGCTGTAGGGCAGATCCCGGGTTGCTGTAAAGGAAGACGAGGAGGCAGAGTATTGCTCCCAAGTTGTAACATTAGGTTTGAATTATATCCTTTCTATCGCCGCGGATCGCCAGAACCGCTTGTTCCGGCTACGAATTATCCAAGTATTGACTCAAAATATTCACAAGATCCGGGGTATCTATCTCACGAGTGTTCAAGAACTAATTATGAAACCGCAATTGAGAAAAAAGGCAGCACAAACATCCTCACTTACTTGTCTTCCAAGGCAAGAAACTCCACCAACAACAACGAGTTCGAGATGACAAATGTTGACAAGAGAGTATTTGGGCTCTACTTGTGCCGTGCTGACATCACTTCCTCACTTTGTGCTGAATGCATAGCAAACGCTACGAATCGAATAGCCTCGGAGTGTCCAATGTCCATAGATGCGGTGATCTGGTACAACCATTGCTTACTTCGCTATTCGAACTACTCTTTCTTCAGAACAATGACCACTGATCCAAGATTCGAGAGGGTGAATGTGACAAACTCTGAGGATTACAAAAGCTACTACAAGTACCAATTGTGGAGTGCATTGACAAAGGTGGCAGGGGATATATGGGACAGGAATGATAGATATTGTACGGAAACGTTTGTGTTGAACCATGTCCAAACGTTGTATGTGCAAGGGCAATGCACCAAAGATTTGTCTACCGGAGATTGTAATTACTGCATACACGATGTGATTGAAACGGCGATTCCGTGGTCCCGTTTGGGAAGCGTAGGTGGCAGAGTTTTGTATCCAAGCTGCACTTTGAGGTTTGAGTTGTTTCCTTTCTATCGGAATGGTACGCACGATCAGCCTCCGCCAACCAAAGAGAAAAATGGCAGATCACGAGCAATTATATTGATTGTTATCATCCCCATTGTTGCTTCGGTGTTACTCTTCTCTTTTTGTTGCTATTTGCTTAGGAAAAGAGCAAGAAAGAGTTACAATAAGACCATCCTCAAACAAAACTTTGGCCAAGAAAGTAACACTATAGGGGGCTTGCAATTCGAATTGTCTATAATTGAAGCTGCAACAAATAACTTTTCAGAAGAGAACAAGGTTGGCAAAGGTGGATTTGGACAAGTTTATAAGGGTGTTCTTCCTGATGGAAGACATATAGCTGTAAAGAGACTTTCAAAAAGTTCTACCCAAGGAGCAGCTGAATTCAAAAATGAGGTTTTATTAATAGCCAAACTTCAACATAAGAATCTAGTGGCATTTATAGGATTTTGTCTTCAAGAGGAAGAGAAGATACTTATCTATGAATATGTTCCAAATAAGAACTTGGACTACTTTTTGTTTGATCCTCATTCAGAGAAGTTATTAAGTTGGACTGAACGCTACAATATTATAGACGGAATTGCTCGAGGAATTCTTTATTTACATGAATATTCTCGTCTGAAAGTTATTCATCGTGATTTAAAACCTAGTAATATATTATTAGATGAAAATATGAATCCTAAAATTTCAGATTTTGGTCTTGCTCGAATTGTGAAACAACAACAAGAATCTACATCCAGAATAGTCGGAACGCTGGGTTATATGTCTCCGGAATATACAATGCAAGGAAAATTTTCAGAAAAATCAGATGTTTTCAGTTTTGGAGTCATGATACTCGAAATTATCATAGGAAAAAAGAATGTAGGTTCCAGTGAATCATATCTTAATGGAGAGGGTCTTCTAAGCTTAGTATGGAGACAATTTTGCAATGAAACACCATTAAGTGTATTGGACCCAAAAATGAAGGGAAATTGCTCTGAATTTGAAGTGATAAGGTGCATTCAGATTGGTTTATTGTGTGTTCAAGAAAATCCAGATGAAAGACCAACAATAGAGGCAATAGTGTCATATCTTAGTAATTTCTCAATTGAATTGCCTTCTCCACAACAACCAGCATTTTTCTTGCATTCTAAAATGGATCCAACAAAAACATTTGCTGGCGAGTCATCAAGTTCTATCTCTGTTAATGAGATATCTGAAAGTACTTTTCTTCCTAGATAG 2415 0.3942 MCRGDVPFDVCGDCVQSATHVLSSECTLSLWGMIWYEQCMVRYSNTCFFSVPSTQPSNPMSNNFNVSTNQTMFDSLLLNTMNKTADEAAFSLNKYATKEQKLTELLTIFNLAQCTRDLSFQACRTCLGFAVGQIPGCCKGRRGGRVLLPSCNIRFELYPFYRRGSPEPLVPATNYPSIDSKYSQDPGYLSHECSRTNYETAIEKKGSTNILTYLSSKARNSTNNNEFEMTNVDKRVFGLYLCRADITSSLCAECIANATNRIASECPMSIDAVIWYNHCLLRYSNYSFFRTMTTDPRFERVNVTNSEDYKSYYKYQLWSALTKVAGDIWDRNDRYCTETFVLNHVQTLYVQGQCTKDLSTGDCNYCIHDVIETAIPWSRLGSVGGRVLYPSCTLRFELFPFYRNGTHDQPPPTKEKNGRSRAIILIVIIPIVASVLLFSFCCYLLRKRARKSYNKTILKQNFGQESNTIGGLQFELSIIEAATNNFSEENKVGKGGFGQVYKGVLPDGRHIAVKRLSKSSTQGAAEFKNEVLLIAKLQHKNLVAFIGFCLQEEEKILIYEYVPNKNLDYFLFDPHSEKLLSWTERYNIIDGIARGILYLHEYSRLKVIHRDLKPSNILLDENMNPKISDFGLARIVKQQQESTSRIVGTLGYMSPEYTMQGKFSEKSDVFSFGVMILEIIIGKKNVGSSESYLNGEGLLSLVWRQFCNETPLSVLDPKMKGNCSEFEVIRCIQIGLLCVQENPDERPTIEAIVSYLSNFSIELPSPQQPAFFLHSKMDPTKTFAGESSSSISVNEISESTFLPR 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211584g00005 804 Pfam Domain of unknown function (DUF3403) 762 804 IPR021820 GO:0004674
Stsc211584g00005 804 ProSiteProfiles Gnk2-homologous domain profile. 185 288 IPR002902 -
Stsc211584g00005 804 SUPERFAMILY Protein kinase-like (PK-like) 471 782 IPR011009 -
Stsc211584g00005 804 Gene3D Phosphorylase Kinase; domain 1 446 561 - -
Stsc211584g00005 804 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 89 799 - -
Stsc211584g00005 804 ProSiteProfiles Gnk2-homologous domain profile. 54 160 IPR002902 -
Stsc211584g00005 804 Pfam Salt stress response/antifungal 68 158 IPR002902 -
Stsc211584g00005 804 Pfam Salt stress response/antifungal 207 286 IPR002902 -
Stsc211584g00005 804 Pfam Salt stress response/antifungal 1 45 IPR002902 -
Stsc211584g00005 804 Pfam Salt stress response/antifungal 311 397 IPR002902 -
Stsc211584g00005 804 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 446 561 - -
Stsc211584g00005 804 Gene3D Transferase(Phosphotransferase) domain 1 562 766 - -
Stsc211584g00005 804 Pfam Protein kinase domain 487 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211584g00005 804 FunFam cysteine-rich receptor-like protein kinase 10 562 763 - -
Stsc211584g00005 804 ProSitePatterns Protein kinases ATP-binding region signature. 492 514 IPR017441 GO:0005524
Stsc211584g00005 804 SMART serkin_6 486 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211584g00005 804 ProSiteProfiles Gnk2-homologous domain profile. 294 401 IPR002902 -
Stsc211584g00005 804 ProSiteProfiles Gnk2-homologous domain profile. 1 48 IPR002902 -
Stsc211584g00005 804 CDD STKc_IRAK 492 756 - -
Stsc211584g00005 804 Gene3D - 1 48 IPR038408 -
Stsc211584g00005 804 Gene3D - 186 288 IPR038408 -
Stsc211584g00005 804 Gene3D - 57 160 IPR038408 -
Stsc211584g00005 804 Gene3D - 296 401 IPR038408 -
Stsc211584g00005 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672|GO:0006468
Stsc211584g00005 804 ProSiteProfiles Protein kinase domain profile. 486 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211584g00005 804 FunFam Cysteine-rich receptor-like protein kinase 25 56 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211584g00005 Stsc-Chr211584 30393 34084 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211584g00005 183 804 Receptor kinase-like Gene Family AT4G05200 44.327 4.06e-174 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc211584g00005 Pkinase 3.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211584g00005 - - ahf:112797275 1144.03