Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211582g00003 ATGTATGCAGAAACTGGTCTTTTCTTCCCATATTTGCAGAACTTCTCTCAAGAACTTCAACAGCTTGAGGAGTATTGCATGAATCAGAAATCCAATGAATCAATGAGTGACCTTGCTCAATCTTCTGCAATGACAGAGTATGATCTGTTAGTAGAAGGAGATTTGTTCAAAGCTCCAGAGCCTATCATGGAAGAACCACCGATGGACGTGGATCCGATGACTGCAGCAGCCATCTCAATGATATCTTGCAGCGAAGATGTATCGTCGCAGGGTCTAGAACCGAGGGATATCGACATTCTTCAGAACGATCATGAGCTCCTGAGTGAGGTGTTTTATGAGTGCAAAAAGGATCTCATAGAGAAGGCAGCTATAGAGTCCCCACTGTCTGATATATTGGAGATTAATATTCCTGCTCTCAATGTAGATGAGATTTTCTCTCAGGAAAATAAACATATTCCCGACATGCCGTTAGCGAAGAGTGTCAGCTCAGGAAGCTTGAATGCAATGGATTGGATGAATTCCACTGGCTTGAAGCCTGCTTTTCTAGACTTCCCTGGGATTGATTTCAATTCGGTTTATGGCATGCGGAGAGCATTTAGCGAGGGAGATATAAAGACACTTGGTAATGGAAACATGAACGTTGCTCAATCTCCCCATGATAGGCCTCCTCTTCTTAGCAACTGCACCAGCGAGGAACGGCAAGAAAAACTCTCAAGATATAGAAACAAGAAGACAAAGAGAAATTTCGGAAGGAAGATTAAGTATGCTTGCAGGAAGGCTCTCGCCGACAGCCAGCCGAGAATTCGCGGAAGGTTTGCAAAGACCGAAGAACCGGACATAAAGAGGCGATGA 852 0.4413 MYAETGLFFPYLQNFSQELQQLEEYCMNQKSNESMSDLAQSSAMTEYDLLVEGDLFKAPEPIMEEPPMDVDPMTAAAISMISCSEDVSSQGLEPRDIDILQNDHELLSEVFYECKKDLIEKAAIESPLSDILEINIPALNVDEIFSQENKHIPDMPLAKSVSSGSLNAMDWMNSTGLKPAFLDFPGIDFNSVYGMRRAFSEGDIKTLGNGNMNVAQSPHDRPPLLSNCTSEERQEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEEPDIKRR 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211582g00003 283 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 151 275 IPR045281 GO:0009909
Stsc211582g00003 283 Pfam CCT motif 233 275 IPR010402 GO:0005515
Stsc211582g00003 283 ProSiteProfiles CCT domain profile. 233 275 IPR010402 GO:0005515
Stsc211582g00003 283 Coils Coil 12 32 - -
Stsc211582g00003 283 MobiDBLite consensus disorder prediction 231 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211582g00003 Stsc-Chr211582 6401 10240 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211582g00003 229 280 C2C2-CO-like Transcription Factor Family AT5G57660 50.909 6.54e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc211582g00003 CCT 1.8e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211582g00003 - - aprc:113853022 436.802