LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc211581g00010	ATGCCAGGAATGAAGCTTGGATTGAACTTTGTTACTGGTTTTGAGAGATCTTTGTCATCTTGGAAAAGTGCAGAGGATCCTGCTGTAGGAGAATATTCTATGAAGTTTGATCCTACAGGTTTTCCACAGGTAATGGAATTCAAAGGATCTGTTAAATATTTCCGAATCGGGCCATGGAATGGCCATTATTTTGCTGTATATCCAACCCAGGAAGATCAATATACATATCATTTTGCACTGGACAAAACCCAGGTGTATTATGAGTTTGAAATACTTGATAGATCCATTTTCCACCTGTATAAACTACAACCTTCAGGTAATTCTATAGGTACAACTTGGAAGAAATATGAAACAAGAACTGAGGTGGCAGTTGCCACAATTGATGGATACAATGTGTGTGGAAGTTATGCTTTTTGTGGTTCAAATGCTATATGCATGGTTGATGCTATCCTTGAAACATGTGAATGCCTAAAAGGATATGTTCCCAAGTTTCCCCAACAATGGAATATGTCAAATTGGTCTGATGGTTGTGTTAGGAAGAGTTCATTGGATTGTAATAACACTGATAGTTTCTTAAGGTACACAGACATAAAAGTGCCAGACACTTCATCCTCATGGTATAACCAGACAATGAATCTTGAAGAATGTAAACAAGTTTGCCTAAAGAACTGTTCTTGCATTGCGTATGCAAATTTGGATATCCGTAATGGAGGAAGTGGCTGCCTTCTTTGGTTTGATAATCTTATTGACATGGTACGATTCTCAACCGCTGGTCAAGACATTTACATCAGAGTCCCTCTTTCAGAATTAGGTAATGACCATGGAAATTTGAAGAAAAAGAAGGTGGGAATTGCAGTTGGTGTGATCATTTTCGGATTGATCACATGTATTAGCCTAGTGATAATAAAAAAATCCGGAGTTGCAAGAATAATTCAAAGAAACAGGCAAAGACAGAAGGTCACTGACCTACCAACATTTGATTTCTCAGTCTTAGTTAAAGCAACAGACAACTTTTCAAGTAGTAACAAAATTGGAGAAGGTGGCTTTGGATCAGTATACAACGGCACACTAACAAATGGCCAAGAGTTAGCTGTGAAAAGGCGTTCAAAGAAGTCTAAACAAGGTTTAGAAGAGTTTAAAAATGAAGTGGCGTTGATAGCTAAACTTCAACATCGTAATCTTGTAAAGCTTCTTGGTTGTTGCATTCAAGGGGAAGAAAAAATACTGGTTTATGAATATATGCCGAACAAAAGCTTGGACTACTTTGTTTTCGATGAAGTCAGAAAAAAGATGCTAGATTGGATCAAGCGTTTCAACATTATCGATGGCATTGCTCGGGGACTTCTTTATCTTCATCAAGATTCTAGATTGAGGATTATCCATAGAGATCTAAAAAATAGCAATATTCTATTGGATGCAAATTTGAATCCTAAAATATCAGACTTTGGTCTAGCTCGAACATTCTTAGGCGATCAACTCGAGGCTAACACAAACAGAGTAGTTGGAACATAG	1512	0.373	MPGMKLGLNFVTGFERSLSSWKSAEDPAVGEYSMKFDPTGFPQVMEFKGSVKYFRIGPWNGHYFAVYPTQEDQYTYHFALDKTQVYYEFEILDRSIFHLYKLQPSGNSIGTTWKKYETRTEVAVATIDGYNVCGSYAFCGSNAICMVDAILETCECLKGYVPKFPQQWNMSNWSDGCVRKSSLDCNNTDSFLRYTDIKVPDTSSSWYNQTMNLEECKQVCLKNCSCIAYANLDIRNGGSGCLLWFDNLIDMVRFSTAGQDIYIRVPLSELGNDHGNLKKKKVGIAVGVIIFGLITCISLVIIKKSGVARIIQRNRQRQKVTDLPTFDFSVLVKATDNFSSSNKIGEGGFGSVYNGTLTNGQELAVKRRSKKSKQGLEEFKNEVALIAKLQHRNLVKLLGCCIQGEEKILVYEYMPNKSLDYFVFDEVRKKMLDWIKRFNIIDGIARGLLYLHQDSRLRIIHRDLKNSNILLDANLNPKISDFGLARTFLGDQLEANTNRVVGT	503

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc211581g00010	503	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	459	471	IPR008271	GO:0004672\|GO:0006468
	Stsc211581g00010	503	CDD	PAN_AP_plant	183	266	-	-
	Stsc211581g00010	503	Gene3D	Hepatocyte Growth Factor	182	262	-	-
	Stsc211581g00010	503	PANTHER	BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN	1	493	-	-
	Stsc211581g00010	503	Pfam	S-locus glycoprotein domain	54	164	IPR000858	GO:0048544
	Stsc211581g00010	503	ProSiteProfiles	PAN/Apple domain profile.	185	267	IPR003609	-
	Stsc211581g00010	503	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	303	413	-	-
	Stsc211581g00010	503	SMART	serkin_6	338	501	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Stsc211581g00010	503	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	184	265	-	-
	Stsc211581g00010	503	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase B120	414	503	-	-
	Stsc211581g00010	503	ProSitePatterns	Protein kinases ATP-binding region signature.	344	366	IPR017441	GO:0005524
	Stsc211581g00010	503	SMART	ntp_6	186	265	IPR003609	-
	Stsc211581g00010	503	Pfam	PAN-like domain	185	251	IPR003609	-
	Stsc211581g00010	503	Gene3D	Phosphorylase Kinase; domain 1	302	413	-	-
	Stsc211581g00010	503	Pfam	Protein kinase domain	339	501	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Stsc211581g00010	503	SUPERFAMILY	Protein kinase-like (PK-like)	319	503	IPR011009	-
	Stsc211581g00010	503	Gene3D	Transferase(Phosphotransferase) domain 1	414	503	-	-
	Stsc211581g00010	503	ProSiteProfiles	Protein kinase domain profile.	338	503	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc211581g00010	Stsc-Chr211581	49032	50950	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc211581g00010	283	503	Receptor kinase-like Gene Family	AT4G23190	55.411	3.71e-79	256

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Stsc211581g00010		Pkinase	2e-33	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc211581g00010	-		-	adu:107464241	875.544