Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211579g00012 ATGGCATCATCAACATTGCCATCTTCTCTATTCCTCCAACTTGATTTCCCATCAACAAGATTCTCCTCAGCTACTTCCTCCAACAAACTCTCCCTTTCATCAAACTCAAACCGCACCTCCTCCTTCCATGTACTTCCAATCCGGGCTTCTGTGTCCGAGAGGCCGACAACACCACCCGTGTCGTCGACCCCTCGGACAAGTCAGCCTGGACCGAATTCTGTACCGACTGAATCAATAGTCGGTACTAGTAACCTACCGATGAGAAAGATCCCGGGCGACCTCGGGATCCCAATCATCGGTGCGTTGAAAGATCGTCAGGATTACTTCTACAACCAAGGCAAGGACGAGTTTTTCAAATCAAGAATCCAAAAATACCAGTCAACCGTTTTCCGCGCCAACATGCCACCTGGACCGTTCATCGCAAACTCACCAAACGTCGTCGCTTTGCTCGACGCCAAGTCTTTTCCCACGCTTTTCGACGTCTCGAAGGTCGAAAAGCGTGACGTGTTCACCGGAACATACATGCCGTCGACGGAGCTCACCGGCGGTTACAGAGTCCTCGCTTACCTGGATCCTTCGGAAGCCAAACACGGCCTTCTGAAACGGTTAATGTTCTTCCTCTTGAAATCTCGCCGCGAAAACGTGATCCCTGAGTTCCGTTCGAGCTACACGGAGTTCTTCGAGTCCTTGGAATCCGAGCTTTCTGAGAAAGGAAAAGCCGATTTTGCCCTCGCCAACGATCAAGCAGCTTTTAACTTCTTGGCGCGATCGCTGTTCGATTCGAACCCTCGCGACACCGAACTCGGTACGGACGGGCCAGGAATCGTTCAGAAGTGGGTTCTGTTTCAACTCAGTCCGATTCTCCGACTCGGTCTGCCTCAGTTCATCGAAGATTCGGTTTTCCACAGCGTTCGGCTCCCGCCGAAGCTGATCATGAAGCAGTACCAGAGGCTCTACGATTTCTTCTACGAAGCCTCGGGGTTCGTGCTGGACGAAGGTGAGAGATTGGGAATCTCGAGGGAGGAGGCGTGCCATAACCTAGTTTTCGCGACGTGTTTCAATTCGTTCGGAGGGATGAAGCTGTTCTTCCCGAACGTGATGAAGTGGATCGGGAGGGCGGGGGTGAATTTGCACGCTCGGCTTGCGGCGGAGATTAGGGCGGCGGTGAAGGAGGCAGGTGGAGAGGTTACGATGGCGGCGATGGAGAAGATGGAGTTGATGAAGTCGGTGGTTTATGAGGCGTTTAGGATTGACCCGCCGGTGCCGTTGCAGTATGGGAAAGCAAAAAGGGACTTAATCATTGAAAGCCATGAACATGCTTTTCAGGTAATTACTTCTTAA 1341 0.5205 MASSTLPSSLFLQLDFPSTRFSSATSSNKLSLSSNSNRTSSFHVLPIRASVSERPTTPPVSSTPRTSQPGPNSVPTESIVGTSNLPMRKIPGDLGIPIIGALKDRQDYFYNQGKDEFFKSRIQKYQSTVFRANMPPGPFIANSPNVVALLDAKSFPTLFDVSKVEKRDVFTGTYMPSTELTGGYRVLAYLDPSEAKHGLLKRLMFFLLKSRRENVIPEFRSSYTEFFESLESELSEKGKADFALANDQAAFNFLARSLFDSNPRDTELGTDGPGIVQKWVLFQLSPILRLGLPQFIEDSVFHSVRLPPKLIMKQYQRLYDFFYEASGFVLDEGERLGISREEACHNLVFATCFNSFGGMKLFFPNVMKWIGRAGVNLHARLAAEIRAAVKEAGGEVTMAAMEKMELMKSVVYEAFRIDPPVPLQYGKAKRDLIIESHEHAFQVITS 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211579g00012 446 PANTHER CYTOCHROME P450 26 85 436 - -
Stsc211579g00012 446 Gene3D Cytochrome P450 85 443 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211579g00012 446 MobiDBLite consensus disorder prediction 54 83 - -
Stsc211579g00012 446 MobiDBLite consensus disorder prediction 46 84 - -
Stsc211579g00012 446 SUPERFAMILY Cytochrome P450 86 436 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211579g00012 446 FunFam Allene oxide synthase, chloroplastic 85 446 - -
Stsc211579g00012 446 CDD CYP74 119 443 - -
Stsc211579g00012 446 Pfam Cytochrome P450 378 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211579g00012 Stsc-Chr211579 83712 85052 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211579g00012 42 443 Cytochrome P450 AT5G42650 60.644 2.86e-173 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211579g00012 K01723 - gmx:100037481 594.349