Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211577g00007 ATGGCTACAAACGGTGTCTCTGATTCCTTATTCAAGATGCCCACCATCAAGTTTACTAAGCTCTTCATCAATGGACAGTTTGTTGATTCTATTTCAGGGAAGACATTTGAAACAATAGATCCAAGAACAGGAGAGGTGATAGCAAAGATCAGCGAGGGAACTAAAGAAGACGTGGATGCTGCTGTTGCGGTGGCGCGTGACGCATTTGACAATGGCCCATGGCCCCGCATGCCCGGACTTGAGAGGGCAAAAATTATGGCGAAATGGGCAGATCTTATAGAAGAAAATGGAGATGAGTTAGCGGCATTGGACACCATTGATGCTGGTTTGCTATACCAATTCTCCAAGTTTGGGATTCCTACAGGAGCAGCGGGATCGTTGCGCTTCTATGCTGGTGCTGCTGACAAGATTCATGGGGAGGTGTTGAAGTGCTCTGGGGAGTTCCATGCATACACATTGATGGAACCAATTGGTGTTGTTGGACACATCATCCCTTGGAATGTCCCCCTTGCTGCGTTCTTCACCAAGGTTGCACCTTCCATGGCTGCTGGCTGCACCATGGTCCTCAAACCCGCTGAACAGACCCCTCTCTCTGCTCTCTTTGCTGCTCATCTCGCAAAGCTGGCTGGTGTCCCGGATGGGGTGCTAAATGTAGTGCCCGGATTTGGGCCAACTGCGGGTGCAGCAATAAGCTCACACATGGACATTGATATGGTTAGCTTTACCGGTTCAGTTGAAACAGGGCGTGAAGTGATGCATGCAGCAGCTAGCAGCAATTTGAAGGCTGTTTCACTTGAATTAGGTGGCAAGTCTCCGCTCATTATTTTTGATGATGCTGATCTTGACAAAGCTGCTGACCTTGCTTTCTTCGGCATGTTCATGAACAAGGGAGAAGTATGTATTGCAGGTTCTCGTGTGTACGTTCAGGAAAGGATATATGATGAACTTGAGAAGAAGTTGGTGGAAAAGGCAAAAGCTTGGATTGTTGGGGATCCTTTTGATCCTAAAACTCACCAAGGGCCTCAGGCTGACAAGAAGCAATTTGATAAAATTCTTTGGTATATTGAGCATGGAATGAAAGAGGGAGCTACCCTTTTGACCGGAGGTAAATCCATCGGCACCAAGGGCTACTTCATTGAACCTACAATTTTCACTAATGTTAAGGAGGACATGCGTATAGCTCAGGATGAAATATTTGGCCCCGTCATGGCGTTAATGAAGTTTAAGACAATTGAGGAAGCAATTAAGAGTGCAAACAATACAAGGTACGGGTTAGCAGCGGGGATAGTGACAAAGAACATAGACACAGCAAACACAATGTCAAGGTCCATTCGTGCAGGCACTATTTGGATCAATTGCTATTTTGTTATTGGGGGTGACATTCCTTTTGGAGGGTTCAAGATGAGTGGATTTGGTGGAAAGGATCTTGGTTTGGATGCACTTTACAAGTACATGCAACTTAAATCTGTTGTAACTCCCATTTACAATTCTCCTTGGCTTTGA 1503 0.4584 MATNGVSDSLFKMPTIKFTKLFINGQFVDSISGKTFETIDPRTGEVIAKISEGTKEDVDAAVAVARDAFDNGPWPRMPGLERAKIMAKWADLIEENGDELAALDTIDAGLLYQFSKFGIPTGAAGSLRFYAGAADKIHGEVLKCSGEFHAYTLMEPIGVVGHIIPWNVPLAAFFTKVAPSMAAGCTMVLKPAEQTPLSALFAAHLAKLAGVPDGVLNVVPGFGPTAGAAISSHMDIDMVSFTGSVETGREVMHAAASSNLKAVSLELGGKSPLIIFDDADLDKAADLAFFGMFMNKGEVCIAGSRVYVQERIYDELEKKLVEKAKAWIVGDPFDPKTHQGPQADKKQFDKILWYIEHGMKEGATLLTGGKSIGTKGYFIEPTIFTNVKEDMRIAQDEIFGPVMALMKFKTIEEAIKSANNTRYGLAAGIVTKNIDTANTMSRSIRAGTIWINCYFVIGGDIPFGGFKMSGFGGKDLGLDALYKYMQLKSVVTPIYNSPWL 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211577g00007 500 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 23 488 IPR016162 GO:0016491
Stsc211577g00007 500 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 23 286 - -
Stsc211577g00007 500 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 265 272 IPR029510 GO:0016491
Stsc211577g00007 500 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 293 304 IPR016160 GO:0016491
Stsc211577g00007 500 SUPERFAMILY ALDH-like 11 496 IPR016161 GO:0016491
Stsc211577g00007 500 FunFam Aldehyde dehydrogenase3 269 458 - -
Stsc211577g00007 500 Pfam Aldehyde dehydrogenase family 28 490 IPR015590 GO:0016491
Stsc211577g00007 500 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 269 458 IPR016163 GO:0016620
Stsc211577g00007 500 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 11 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211577g00007 Stsc-Chr211577 37990 42021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211577g00007 12 500 Aldehyde Dehydrogenase Gene Family AT3G24503 69.184 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211577g00007 K12355 - gmx:100811540 770.77