Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211577g00005 ATGATGGATTTTAGCAATTGCTACCCGGAAGATCCTCATGCACTGAACTTTGGTGCTCAGAGAGGATTTGTGAAAGTATTGAAATCAGGATTCAAAGAAACATTGTTCCCTGACGATCCCTTCAGGGAGATTAACAAAGCGGATAAGCCATTGTCTAAGGCTATAAAATGGCTTCAGTACTTGGTTCCATTCTTCCAGTGGCTGCCGACGTACACTTGGAAGTTGTTCATCTCCGACTTCTTCGCCGGCCTCACCGCCACCAGCATTGCCGTTCCTCAAGCCATCAGCTATGCCAAACTTGCTGATCTTCATCCCATTATTGGCCTGTATACATGTTTTGTGCCACCAATTGTGTATGCTATATTTGGGAGCTCAAGGCACTTATCAGTGGGGCCAATAGCATCAGCATCATTGCTGATATCTCAAACAATTTCAACGGTGGTAAGGCCAGAAGACGACCCCGTATTGTACCTTCACTTGGTTTTGACAACTACATTTGTTGCTGGCCTCTTCCAAGCTTGTTTGGGTATCCTCAGGTTGGGAATATTAGTGGATTTATTATCGCATTCAACGATCACAGGTTTCATGGGAGGAGCAGCAGTAATGCTTACCCTCCAACAACTGAAGGGAATATTCGGCTTGAAACATTTTGCGCATAAAACTGGCGTCATAACTGTGCTCAAGTCCATATGGACCTATAGACACGAGATAAGGTGGCAAACCACCGTTATGGGTTTGATCTTCCTTGCTTACCTTCAGATTACAAAACACCAGAGGAATAGAAACCGGAAACTCTTTTGGCTATCAGCTATGGCTCCAATGACAACTGTAATAGTGGGTGGCGTTTTCACTTACCTCGTCAATGGAAAACGGCATGGAATTCAAACCGTGGGTCACCTGAGCAGAGGAATAAATCCTCTGTCCATCAAAGACTTGAGATTTGACAGCACGTATTTAGCACCGGTTCTGAGAGCTGGTTTTATCACGGGTGTTTTATCCATGGCGGAGGGAATAGCAATAGGAAGAAGCTTTGCTGTGGTTGAAAATACTCCTCATGATGGCAACAAAGAGATGATAGCTTTTGGTCTTATGAACTTGTGTGGTTCTATTACTTCATGTTACTTGACTACTGGACCATTTTCGAAAACGGCAGTGAATTACATTGCAGGGTGCAAGACAGCGATGTCAAACTTAGTACAAGCATTCCTAGTGGCATTCACACTTGAGTTTTTGGCTCCTCTTTTTGGTTACACACCTCTCGTTGTTCTATCAGCAATCATCATCTCTGCAGTGCTGGGATTCCTCAATTATGCAGAAGTTGTTCGTCTTTACAAAGTTGACAAGTTTGATTTCGTCATTTGCATGGCTGGTTTCTTGGGAGTAATCTTCATAGCCTTGGACGTTGGTCTCATGATCTCTGTGGGTCTTAGCATTCTTAGAGCGCTATTATATGTGGCAAGGCCTGATTCATGTAAGCTTGGAAAGTTACCTGAATTGGGTTTGTATAGAGATGCTGAACAATACACGGTTTCAACACTCCCAGGGATTCTAATTGTACAACTTGGTTCTCCCATGTACTTTGCAAATTCTAATTACGTCAAAGAAAGAATTATGAGGTACATTCGATGTGAAGAAGACTCTACTGGAGTTATTGTTGAGCAGATCATACTGGATTTGTCAGGAGTGACATCCATTGACACCACTTCTCTTGAAGGATTGTGGGAAACAAATAAAATTATTGAAAATAATGGAATGCAGTTGAAATTTGTGAACCCAAGGATAGAGATAGTGGAGAAAATGATGGCAGCCAAGTTTGTTTCAAGGATTGGGAAGGAATCGTTTTTCCTTACACTAGAGGATGCAGTGAAGGCAAGTCAAATAGCACTTCGCAAATCAAGGGCAAGCAATTCTGAAGATGGAATTAGAGGAACAACAATTCATCAATCTGCACCTGATTCGTGCTAG 1965 0.426 MMDFSNCYPEDPHALNFGAQRGFVKVLKSGFKETLFPDDPFREINKADKPLSKAIKWLQYLVPFFQWLPTYTWKLFISDFFAGLTATSIAVPQAISYAKLADLHPIIGLYTCFVPPIVYAIFGSSRHLSVGPIASASLLISQTISTVVRPEDDPVLYLHLVLTTTFVAGLFQACLGILRLGILVDLLSHSTITGFMGGAAVMLTLQQLKGIFGLKHFAHKTGVITVLKSIWTYRHEIRWQTTVMGLIFLAYLQITKHQRNRNRKLFWLSAMAPMTTVIVGGVFTYLVNGKRHGIQTVGHLSRGINPLSIKDLRFDSTYLAPVLRAGFITGVLSMAEGIAIGRSFAVVENTPHDGNKEMIAFGLMNLCGSITSCYLTTGPFSKTAVNYIAGCKTAMSNLVQAFLVAFTLEFLAPLFGYTPLVVLSAIIISAVLGFLNYAEVVRLYKVDKFDFVICMAGFLGVIFIALDVGLMISVGLSILRALLYVARPDSCKLGKLPELGLYRDAEQYTVSTLPGILIVQLGSPMYFANSNYVKERIMRYIRCEEDSTGVIVEQIILDLSGVTSIDTTSLEGLWETNKIIENNGMQLKFVNPRIEIVEKMMAAKFVSRIGKESFFLTLEDAVKASQIALRKSRASNSEDGIRGTTIHQSAPDSC 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211577g00005 654 Gene3D STAS domain 487 628 IPR036513 -
Stsc211577g00005 654 ProSiteProfiles STAS domain profile. 506 625 IPR002645 -
Stsc211577g00005 654 PANTHER SULFATE TRANSPORTER 28 627 IPR001902 GO:0016020|GO:0055085
Stsc211577g00005 654 Pfam Sulfate permease family 76 456 IPR011547 GO:0016020
Stsc211577g00005 654 CDD STAS_SulP_like_sulfate_transporter 514 618 - -
Stsc211577g00005 654 SUPERFAMILY SpoIIaa-like 507 624 IPR036513 -
Stsc211577g00005 654 NCBIfam sulfate permease 63 621 IPR001902 GO:0016020|GO:0055085
Stsc211577g00005 654 Pfam STAS domain 508 621 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211577g00005 Stsc-Chr211577 25722 29795 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211577g00005 13 633 Inorganic Solute Cotransporters AT5G19600 56.752 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211577g00005 K17471 - gmx:100789107 853.203