Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc211576g00009 | ATGATGAAGAACACCATGTCTTCTCTTACTCATAAACTCTCTCTTCTTCTTTCATTTCTGGCATCATCTTCATTTGTTCTTACTACAACCACAGCTACTGTGTTGTCATCGAAAGTTTCAATCAAAGATACAATTTTGGAGCCTTTCAAGTGCTCCACAACCATAAAAACATGCAATGCCTCACTCTACCACATAACCTATGATGATCATGATGTTAATAACATATCTTCCAATTACACAAACTCCTCAGAAATAAGACCAATCACACGTGGCAAGAGACAAGACCACCTCATAACAGTGCCTTGTTCATGCAGAAACAACAACCTCACTGGTTATTACTATGACACAACCTACACAGTGAAGCCCAATGATGATTTCTATGACATTAATAACTTTGTTTACAGTGGTCAAGCCGTGCATATTGATGGTGTTCTTCACCCGGGTCAGAATCTGAGTATTCATATTCCATGTGGGTGTTCATCATCAGAGATTGAGTCAGAAATTGTTGTGACTTACACGGTTCAAAGGAATGATACCACTTATGGAATAGCTATGCTTTTGAATTCTACGGTTTCTGAGATTGAGAGTGTGAATCATGTTTTGGTTCAGAACCCATCATATATAGAACCGGGTTGGGTTTTGTTTGTTCCTAGCCAATCTAATGGAATTCCACTGCATCCAACAAAAGAAAAGAAACCAAAGTGGCAGATAATCATTGGCGTCTTAGCAGCTGTGACATTACTTTCAATGATTGCTGTCATCTTTCTCATTATCAGGAGAAGTAGATCTAAGGCAGCATTCGCCATTGATAATCCAAATAGTGCCTCTAAAAGATCCATTTCCAAAAAGAACTCTGACATTCATAATAAAGATTACATACAAGATGCAACATCATTTGATTCAGAAAGACCAGTAATTTACTCTATTGAGGAGATAGAAGCTGCTACAAATAACTTTGATGAAAACAGAAGAATTGGAGTTGGTGGGTATGGCAGTGTATATTTTGGAATGTTAGACCACAAGGAGGTTGCTGTAAAGAAGATGAAGTCCAATAAATCCAAAGAATTCTTTGCAGAACTGAAGGCCTTATGTAAAATCCATCACATAAACATTGTGGAGTTGTTGGGATATGCAAGTGGAGATGACCACCTTTATTTGGTGTATGAGTATGTTGCAAATGGATCTCTCAGTGATCATCTTCATGATCCTTTACTCAAAGGTCATCAGGTTCTATCATGGTGTGCTAGGACTCAGATTGCACTGGATGCAGCAAAAGGAATTGAATACATACATGATTACACAAAAGCACAATATGTCCACCGTGATATCAAGACTACTAACATTCTTCTTGATCAGAAACTCAGAGCCAAGGTAGCAGATTTTGGGCTTGCAAAGTTGGTGGAAAGGACCAATGATGAAGAATTCATTGCAACAAGGCTTGTTGGAACACCAGGCTACCTTCCACCAGAATCGGTGAAAGAGTTACAAGTGACCACAAAAACTGATGTGTTTGCATTTGGAGTAGTTCTGTCAGAGCTCATAACAGGAAAACGTGCGCTATTTCGTGACACCCAACAACCCAACCACACCCAATCTCTTATTTCACTTGTCAAGAAAATATTCCAAGATAGTGACCCCTTAACTGCTTTAGAGAATGTGACAGATGTGAATCTTCAACATAACTATCCCATGGACGCTATGTATAAGATGGCAGAAGTAGCAGAGAGGTGCTTGAGGGAGGAAGCAATGGAGAGGCCTGAAATGAAGGAGATGGTGGGGGCGCTGTCACAGATAGTTATGAGTTCCATAGAGTGGGAAGCATCACTCGGAGGAGATAGCCAAGTTTTCAGCGGCGTTTTTATTGGAAGATAA | 1872 | 0.3969 | MMKNTMSSLTHKLSLLLSFLASSSFVLTTTTATVLSSKVSIKDTILEPFKCSTTIKTCNASLYHITYDDHDVNNISSNYTNSSEIRPITRGKRQDHLITVPCSCRNNNLTGYYYDTTYTVKPNDDFYDINNFVYSGQAVHIDGVLHPGQNLSIHIPCGCSSSEIESEIVVTYTVQRNDTTYGIAMLLNSTVSEIESVNHVLVQNPSYIEPGWVLFVPSQSNGIPLHPTKEKKPKWQIIIGVLAAVTLLSMIAVIFLIIRRSRSKAAFAIDNPNSASKRSISKKNSDIHNKDYIQDATSFDSERPVIYSIEEIEAATNNFDENRRIGVGGYGSVYFGMLDHKEVAVKKMKSNKSKEFFAELKALCKIHHINIVELLGYASGDDHLYLVYEYVANGSLSDHLHDPLLKGHQVLSWCARTQIALDAAKGIEYIHDYTKAQYVHRDIKTTNILLDQKLRAKVADFGLAKLVERTNDEEFIATRLVGTPGYLPPESVKELQVTTKTDVFAFGVVLSELITGKRALFRDTQQPNHTQSLISLVKKIFQDSDPLTALENVTDVNLQHNYPMDAMYKMAEVAERCLREEAMERPEMKEMVGALSQIVMSSIEWEASLGGDSQVFSGVFIGR | 623 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc211576g00009 | 623 | Gene3D | Phosphorylase Kinase; domain 1 | 297 | 390 | - | - | |
Stsc211576g00009 | 623 | ProSiteProfiles | Protein kinase domain profile. | 319 | 600 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc211576g00009 | 623 | PIRSF | TyrPK_CSF1-R | 557 | 612 | - | - | |
Stsc211576g00009 | 623 | PIRSF | TyrPK_CSF1-R | 218 | 264 | - | - | |
Stsc211576g00009 | 623 | PIRSF | TyrPK_CSF1-R | 2 | 133 | - | - | |
Stsc211576g00009 | 623 | PIRSF | TyrPK_CSF1-R | 417 | 518 | - | - | |
Stsc211576g00009 | 623 | PIRSF | TyrPK_CSF1-R | 323 | 412 | - | - | |
Stsc211576g00009 | 623 | SMART | LysM_2 | 171 | 217 | IPR018392 | - | |
Stsc211576g00009 | 623 | FunFam | Kinase family protein | 294 | 390 | - | - | |
Stsc211576g00009 | 623 | CDD | LysM | 170 | 216 | IPR018392 | - | |
Stsc211576g00009 | 623 | SMART | serkin_6 | 319 | 599 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc211576g00009 | 623 | FunFam | PTI1-like tyrosine-protein kinase 3 | 391 | 609 | - | - | |
Stsc211576g00009 | 623 | ProSitePatterns | Protein kinases ATP-binding region signature. | 325 | 347 | IPR017441 | GO:0005524 | |
Stsc211576g00009 | 623 | PANTHER | CHITIN ELICITOR RECEPTOR KINASE 1-RELATED | 33 | 619 | IPR044812 | GO:0019199|GO:0045087 | |
Stsc211576g00009 | 623 | SUPERFAMILY | LysM domain | 170 | 217 | IPR036779 | - | |
Stsc211576g00009 | 623 | Pfam | Protein kinase domain | 320 | 592 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc211576g00009 | 623 | Pfam | LysM domain | 172 | 217 | IPR018392 | - | |
Stsc211576g00009 | 623 | ProSiteProfiles | LysM domain profile. | 170 | 216 | IPR018392 | - | |
Stsc211576g00009 | 623 | SUPERFAMILY | Protein kinase-like (PK-like) | 303 | 595 | IPR011009 | - | |
Stsc211576g00009 | 623 | Gene3D | Transferase(Phosphotransferase) domain 1 | 391 | 608 | - | - | |
Stsc211576g00009 | 623 | Gene3D | LysM domain | 164 | 222 | IPR036779 | - | |
Stsc211576g00009 | 623 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 438 | 450 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc211576g00009 | Stsc-Chr211576 | 61550 | 64740 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc211576g00009 | 299 | 623 | Receptor kinase-like Gene Family | AT1G51940 | 51.964 | 5.57e-116 | 358 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LysM | Stsc211576g00009 | Pkinase | 1.6e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc211576g00009 | - | - | gmx:100800907 | 789.645 |