Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211575g00009 ATGACTGCACAAGACAAACCCGGTACCGTCACTTCCCATCACCACCAATCACAACCACCGCCACCGCCACCACCCTCCAACGCCGCCGTCGTCACATCCCACCACCACCACTCTTCACATCCCACAGCTCCACCTCAGCCCTACCCCCCTCCTCCTCCTCAGTATGGCACCTTCCAAGGCGTCTCCAACTACCCTCCCCCTCCTAGGGATCCTCACCCAGCCATCGGGTTCCCCCACCCTGTTCCGCCGCCTGGTGCTGCCGACCACTCCGCCCCTCATCCGCCCTATTACCCTCATGGCTACCAAGCTGTTCCCGTTGCTGAAGGAAGGCCTGTACGAGAACCCCGCCTTGGTTGCTGCGGTCTTGGTTGCGGCTGGTGCCTGTTCATATTAGGCTTCTTGCTTGCTGGTATTCCGTGGTATGTTGGAGCAATAATTATGCTCTGTTCCAGAGTAGACCATCGGGAGAAACCTGGATATGTTGCGTGTATAATTGCTGCTGTTCTGGCAACAGTCGCGGTTATTCTTGGCGTGACAAAGGGAGCCGAAGACTGGGACTGGTAA 564 0.5762 MTAQDKPGTVTSHHHQSQPPPPPPPSNAAVVTSHHHHSSHPTAPPQPYPPPPPQYGTFQGVSNYPPPPRDPHPAIGFPHPVPPPGAADHSAPHPPYYPHGYQAVPVAEGRPVREPRLGCCGLGCGWCLFILGFLLAGIPWYVGAIIMLCSRVDHREKPGYVACIIAAVLATVAVILGVTKGAEDWDW 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211575g00009 187 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 31 185 IPR044804 -
Stsc211575g00009 187 MobiDBLite consensus disorder prediction 1 15 - -
Stsc211575g00009 187 MobiDBLite consensus disorder prediction 1 92 - -
Stsc211575g00009 187 MobiDBLite consensus disorder prediction 64 91 - -
Stsc211575g00009 187 MobiDBLite consensus disorder prediction 42 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211575g00009 Stsc-Chr211575 61319 64306 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211575g00009 55 185 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 33.696 4.68e-25 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211575g00009 - - adu:107459876 278.87