Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211575g00008 ATGCTCTTCCACCTCCAAGAAGCGGAACCTTCAAAAGAGCGGCCCCACGGCCACCACCACCCGCGGAGCCATGAGGTACAGGGGTGTGAGGCCGAGGCCATGGGGTCGTTATCTCACAGAGATAAGGGACCCTCAATGCAATCTAAGGAGCGCCGTTCGCTGGGGACATTTGACACGGCGGAGGAGGCCGCCCGTACCTACGACTGCGCCGCCATAGTGATCCATGGCCTGAAGGCGAAAACCAACTTTGTGTACCCTTCGTCCGTAACCGCCGTGGCCAACCTCCTTAACCAGTGTGACTACCTCTTCGCTACTCGGCAGTTCAGCTTCCCCGGGCATTACAATAATCAACTCCTTAACAGTGGTTGTTGGGCTGACCCCTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTTTCTTCCTTTTCAACCTTCCAAAAGAACCTTAACTTCATCAAGATGCTCCTCGTCCGTGACTTGATAGCCTCTTCTTCTTCTTCTTACACCAACCCTTCTACTCTTTCATCTTCTTTTAGCCACCATTTATCCTACCCCAAGGGCAGTTTAGTCAACTCACCACATGGTAGAAATGTTACTAAAAACAACTATACCGTACCCTGTCCTTCCTCACAAGAGTTATTTCAACACTCGGACTCATCATCATCGGGGTTGTTGCAAGAGATAGTTAGCAGTACCTTGAAAAATCCCAAGCCCAGTGATGAAAGCGAGTGTGTGTTGTTAGGCAATCCAATTTCTTTATCATCATCAGAGGGTTCTTGCCACCTTCACACTGACTCATTTCCTCTTCTTCCTCCGGCTGTTTCCACTGGCGATACGATGAAGAAAGACGATGGTTTTAATGTTCCTTTAATTTGTATCAAGATGGTTTCCTCATGCAGCAACTTGGAGGTAGCTGCTGGAGATTGA 924 0.4957 MLFHLQEAEPSKERPHGHHHPRSHEVQGCEAEAMGSLSHRDKGPSMQSKERRSLGTFDTAEEAARTYDCAAIVIHGLKAKTNFVYPSSVTAVANLLNQCDYLFATRQFSFPGHYNNQLLNSGCWADPFSSSSSSSSSFSSFSTFQKNLNFIKMLLVRDLIASSSSSYTNPSTLSSSFSHHLSYPKGSLVNSPHGRNVTKNNYTVPCPSSQELFQHSDSSSSGLLQEIVSSTLKNPKPSDESECVLLGNPISLSSSEGSCHLHTDSFPLLPPAVSTGDTMKKDDGFNVPLICIKMVSSCSNLEVAAGD 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211575g00008 307 MobiDBLite consensus disorder prediction 7 27 - -
Stsc211575g00008 307 CDD AP2 49 83 IPR001471 GO:0003700|GO:0006355
Stsc211575g00008 307 SMART rav1_2 39 90 IPR001471 GO:0003700|GO:0006355
Stsc211575g00008 307 MobiDBLite consensus disorder prediction 1 55 - -
Stsc211575g00008 307 SUPERFAMILY DNA-binding domain 47 84 IPR016177 GO:0003677
Stsc211575g00008 307 Gene3D AP2/ERF domain 22 85 IPR036955 GO:0003700|GO:0006355
Stsc211575g00008 307 ProSiteProfiles AP2/ERF domain profile. 14 84 IPR001471 GO:0003700|GO:0006355
Stsc211575g00008 307 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 47 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211575g00008 Stsc-Chr211575 57362 58525 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211575g00008 48 86 AP2-EREBP Transcription Factor Family AT1G24590 79.487 1.88e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211575g00008 - - aip:107641557 157.147