Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc211573g00012 | ATGGTTCTACGACTACGACCGTGGTTGTGTCAAAGAAGGGATCATCGTCATCGTAATAATAACAATAATAATGCAGTGCCTCGGCGTATTGAAGAAGGGTTAATGGCTGAAAGGAGAGAATATATAAATAGGAGGCAGGACATACGGGTAGAACTGAATGATGTTACAGCACAAAGAAATAATAATGCTACGGTAGCTTTGAGAATACTGCCGCCAGTTAGAACATTCGGTGAAGAAGACGAAGCAATTGATGAATGCTGCCCCATTTGCAGGGAAGTGTTTAAGAATGGGGACTTGATTCAACCTTTTAGAAGGAGACATAATCATGAGACCAACAGAGTCACAGAGGCAGCAACATCAGAGCCAATACAGACAGCTTATCGTATTGAACGTTTAATGGCTCATCAGAGAGAATATGTAGATTATAGTAGGCTACAACAACATACACGGCCACAACACAATGATGATGATTTTTCTGCAAAAATAAGCATTGTTAGGAAAGCTTTGAGGGTGTTGCCACCGGTTAAGAGCTTTATTGTTGAAGACAAAAGCAATGGATGCTCTGATATGCTTGAATGCTCTATTTGCATGGAAGTTTTTAAGGTTGGGGAGTTGATTCAACCTCTTGGATTGTGTTCTCATCAGTTTCATTCTTCTTGTCTATATTCTTGGTTGCACAGTGGAAAATCTACCTGTCCCCTTTGCCGTGTGGATTTAGCAACCACATAG | 729 | 0.4074 | MVLRLRPWLCQRRDHRHRNNNNNNAVPRRIEEGLMAERREYINRRQDIRVELNDVTAQRNNNATVALRILPPVRTFGEEDEAIDECCPICREVFKNGDLIQPFRRRHNHETNRVTEAATSEPIQTAYRIERLMAHQREYVDYSRLQQHTRPQHNDDDFSAKISIVRKALRVLPPVKSFIVEDKSNGCSDMLECSICMEVFKVGELIQPLGLCSHQFHSSCLYSWLHSGKSTCPLCRVDLATT | 242 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc211573g00012 | 242 | SMART | ring_2 | 193 | 235 | IPR001841 | - | |
Stsc211573g00012 | 242 | PANTHER | RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING | 136 | 236 | - | - | |
Stsc211573g00012 | 242 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 147 | 241 | IPR013083 | - | |
Stsc211573g00012 | 242 | Pfam | Ring finger domain | 192 | 236 | IPR001841 | - | |
Stsc211573g00012 | 242 | SUPERFAMILY | RING/U-box | 192 | 240 | - | - | |
Stsc211573g00012 | 242 | ProSiteProfiles | Zinc finger RING-type profile. | 193 | 236 | IPR001841 | - | |
Stsc211573g00012 | 242 | CDD | RING-H2 | 193 | 236 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc211573g00012 | Stsc-Chr211573 | 65507 | 68483 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc211573g00012 | 154 | 236 | C3H Transcription Factor Family | AT2G17450 | 37.931 | 2.48e-10 | 56.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc211573g00012 | - | K19039 | aip:107632256 | 167.933 |