Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211572g00013 ATGGAGATTGTCGATCGTAGTGTCAAGAAACTTCGCGGAAAGGAGATTCCGTTGGTGAAAATGGTGTGGAACCATGGAGGAACGGAAGAGTACACGTGGGAGAAAGAATCTGAGATGAGAGAGCACCATCCATTGCTATTCGTAGGAAGTGGAGTTGATGGAATTGGTTTGTGGAATTGTGAAAAAAAAGGTGTTTTAAGAGGAATGGGACATAAAGAATGGCTTGCGGAAGTTCAATTTCTAAGCATTGTTAGTCACCCAAATCTGGTTAAGCTTTTAGGATACTGCTCTGTAGACGGTGAAAGAGGGATCCAATGGCTGTTGGTGTATGAGTTCATGCCCAACAGAAGCGTTGAAGATCACCTCTTCAGTAAAACTTTACCACCTCTTACGTGGAAAATAAGATTGGAGATCATGCTTGGTGCTGCTCAAGGATTAGCGTATCTACACGAGGGACTAGAGATTCAGGTGATATACCGAGATTTCAAGTCTTCAAATGTTCTATTGGATGAGAACTTCCACTCAAAGCTCTCAGATTTTGGTCTTGCTAGGGAAGGTCCACAAGGTGACCATACTCACGTCTCCACCGCGGTAGTTGGTACTCAGGGATATGCTGCTCCAGAGTATATTAAAACAGGTCACCTCAAAGTTCAGAGTGACATGTGGAGTTCTGGCGTTGTCCTCTATGAGATTCTCACCGGAAGGCGATCACTAGAAAGAAACTGTCCACCACCAGAACAAAAGCTACTAGATTGGGTTAAACAATACCCTGCTTATAGCAACATATTTACCATGATAATTGATACCCGTTTGAGGAATCAATATTCCCTCCCTGCGGCTCGCGAGGTAGCCAAGTTGGCCGAAAGCTGCTTAAAGAAGAACCCTGAAGACAGACCATCCATGAATAAAATAGTTGAGGGTCTGAAGCACGCATTGCAAATTTCAGAAATGACAAGCAGTTCTAGCAGTGCAGGCGAATCGTCACGGTCAAAGTTGGGCCGAAAAGGTAAATAG 1014 0.4418 MEIVDRSVKKLRGKEIPLVKMVWNHGGTEEYTWEKESEMREHHPLLFVGSGVDGIGLWNCEKKGVLRGMGHKEWLAEVQFLSIVSHPNLVKLLGYCSVDGERGIQWLLVYEFMPNRSVEDHLFSKTLPPLTWKIRLEIMLGAAQGLAYLHEGLEIQVIYRDFKSSNVLLDENFHSKLSDFGLAREGPQGDHTHVSTAVVGTQGYAAPEYIKTGHLKVQSDMWSSGVVLYEILTGRRSLERNCPPPEQKLLDWVKQYPAYSNIFTMIIDTRLRNQYSLPAAREVAKLAESCLKKNPEDRPSMNKIVEGLKHALQISEMTSSSSSAGESSRSKLGRKGK 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211572g00013 337 MobiDBLite consensus disorder prediction 315 329 - -
Stsc211572g00013 337 Pfam Protein kinase domain 71 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211572g00013 337 SUPERFAMILY Protein kinase-like (PK-like) 69 306 IPR011009 -
Stsc211572g00013 337 MobiDBLite consensus disorder prediction 315 337 - -
Stsc211572g00013 337 FunFam Lectin-domain containing receptor kinase A4.3 113 325 - -
Stsc211572g00013 337 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Stsc211572g00013 337 Gene3D Phosphorylase Kinase; domain 1 60 113 - -
Stsc211572g00013 337 PANTHER OS01G0588500 PROTEIN-RELATED 69 312 - -
Stsc211572g00013 337 Gene3D Transferase(Phosphotransferase) domain 1 114 331 - -
Stsc211572g00013 337 ProSiteProfiles Protein kinase domain profile. 1 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211572g00013 Stsc-Chr211572 78866 85729 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211572g00013 70 308 Glycoside Hydrolase AT3G07070 45.643 6.95e-64 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Stsc211572g00013 Pkinase 1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211572g00013 - - adu:107483795 492.271