Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211571g00007 ATGTACAACAGACAACAAAGATATGGAAAGGTGTTCAAGAGCTTTGTGTTGGGGAGGTTCACAGTGTTCATGACAGGGAGAGAAGCAAGCAAGATATTACTAACCGGGAAAGATGGGATTGTCAGCTTGAACTTGTTTTACACTGGCCAGCAAGTTCTTGGCCCCACCAGCTTGTTGCAAACCAATGGAGATGCACACAAAAGGCTTAGGAGGCTCATTGCTGAGCCTTTGTCCATTGATGGCCTTAAGAAATACTTCCATTTCATCAATACTCAAGCAATGCAAACCTTGGATCATTGGCAAGGAAGGAAAGTCCTTGTTCTTGAAGAAGCTTCCACATTTACTCTGAAAGTGATTGGACATATGATCATGAGCTTAGATCCAACAAGCGAGGAGCAAGAGAAGTTTCGGTCGAATTTCAAGGTTATCTCTTCTTCATTTTCCTCCATGCCTATCAAGCTTCCAGGAACAGCTTTCCATCGCGGTATCAAGGCTCGAGATAGGATGTATGAGATGTTGGATTCTATAATTGCGCGGCGAAGAAGTGGCCAAGAGTTTCAGCAAGATTTCTTGGAGTCCTTGATTATGAAACATAGCAAAGGAGGAAAAGAAGATGATGATGAGAACAAACTCACTGACAAACAGTTGAAGGACAATGTACTAACTCTGCTTGTTGCAGGACATGATACCACAACTGCTGCTCTAACATGGCTCATCAAATTTCTTGAAGAAAACCCTCATGTTCTTGAACAACTCAGGGATGAACATAAACAAATTGTTGAAAATAGAAAGATTGGAACAGATCTTACATGGTCTGAAGTTAACAACATGCCTTACACAACCAAAGTGATCAGCGAAACCCTTCGACGAGCGACGATATTGCCTTGGTATTCAAGAAAAGCTTCCCAGGATTTTGAAGTTGATGGATACAGAATTAAGAAAGGTTGGTCAGTTAATCTTGATGTTGTTTCTATACACCATGACCCTGAAGTGTTTCCAGATCCTGAAAGATTTGACCCTTCAAGATTTGATGAGCCTTTAAGGCCTTTCAGCTTTCTTGGATTTGGTAGTGGACCACGTATGTGTCCTGGAATGAACCTTGCCAAGATTGAAATCTGTGTCTTCATCCACCACCTTGTTACCAGATACAAGTGGAAGCCTCTAGATAGAGACAATTCAGTCCAACCAACACTTGTGAGGATGCCAAAGAACAAGTATCCTGTTATGGTGGAGCCACTGTAA 1242 0.4195 MYNRQQRYGKVFKSFVLGRFTVFMTGREASKILLTGKDGIVSLNLFYTGQQVLGPTSLLQTNGDAHKRLRRLIAEPLSIDGLKKYFHFINTQAMQTLDHWQGRKVLVLEEASTFTLKVIGHMIMSLDPTSEEQEKFRSNFKVISSSFSSMPIKLPGTAFHRGIKARDRMYEMLDSIIARRRSGQEFQQDFLESLIMKHSKGGKEDDDENKLTDKQLKDNVLTLLVAGHDTTTAALTWLIKFLEENPHVLEQLRDEHKQIVENRKIGTDLTWSEVNNMPYTTKVISETLRRATILPWYSRKASQDFEVDGYRIKKGWSVNLDVVSIHHDPEVFPDPERFDPSRFDEPLRPFSFLGFGSGPRMCPGMNLAKIEICVFIHHLVTRYKWKPLDRDNSVQPTLVRMPKNKYPVMVEPL 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211571g00007 413 SUPERFAMILY Cytochrome P450 3 412 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211571g00007 413 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 355 364 IPR017972 GO:0005506|GO:0016705
Stsc211571g00007 413 PRINTS E-class P450 group I signature 321 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211571g00007 413 PRINTS E-class P450 group I signature 281 299 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211571g00007 413 PRINTS E-class P450 group I signature 5 24 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211571g00007 413 PRINTS E-class P450 group I signature 215 232 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211571g00007 413 PRINTS E-class P450 group I signature 352 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211571g00007 413 PRINTS E-class P450 group I signature 362 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211571g00007 413 PRINTS E-class P450 group I signature 235 261 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211571g00007 413 Pfam Cytochrome P450 3 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211571g00007 413 FunFam Cytochrome P450 family 722 subfamily A polypeptide 1 1 413 - -
Stsc211571g00007 413 CDD CYP90-like 4 412 - -
Stsc211571g00007 413 Gene3D Cytochrome P450 1 412 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211571g00007 413 PRINTS P450 superfamily signature 282 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211571g00007 413 PRINTS P450 superfamily signature 353 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211571g00007 413 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211571g00007 413 PRINTS P450 superfamily signature 226 243 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211571g00007 413 PANTHER CYTOCHROME P450 26 6 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211571g00007 Stsc-Chr211571 53350 56144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211571g00007 4 393 Cytochrome P450 AT5G45340 37.436 5.11e-93 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211571g00007 - - aip:107644926 790.801