Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211571g00002 ATGGACCACATCGCAGATGCACAGCGTACGGATCTCATGACAATAACACGCTTCGTCCTCAACGAGCAGTCAAAGCACCCTGAATCGCGCGGTGACTTCACCATCTTACTCAATCACATTGTTCTTGGTTGCAAGTTCGTCTGCTCCTCTGTTAACAAGGCTGGTCTCGCCAAACTCATTGGACTTGCTGGAGAGACTAACGTTCAGGGTGAAGAGCAGAAGAAACTGGATGTGCTTTCCAATGAAGTCTTCATCAAGGCCTTGATTAGCAGTGGCCGAACTAGCATATTGGTTTCAGAAGAAGACGAGGAAGCAACTTTCGTGGAGGCTTCTTTGCGTGGAAAGTACTGCGTCGTTTTTGATCCTTTGGATGGTTCTTCTAACATTGATTGTGGCGTTTCTATTGGCACCATATTTGGGATTTATATGGTGAAAGATGTGAATGAACCAACACTAGAAGATGTTTTGCAATCTGGCAAGAACATGTTGGCAGCTGGTTATTGTATGTATGGAAGCTCTTGCACGTTTGTGTTAACCACTGGTAAAGGTGTTAATGGTTTCACACTTGACCCATCACTTGGTGAGTTCATACTAACTCACCCTGACATCAAGATCCCAAAGAAAGGCAAGATTTATTCAGTGAATGAAGGAAATGCCATGAACTGGGATGGTCCTACTGCCTCTTATGTGGAGAGATGCAAGTTCCCCAAAGACGGTTCATCGCCAAAGTCTCTAAGATATATTGGAAGCATGGTAGCTGACGTTCATCGAACATTGCTATACGGTGGTATCTTTTTGTACCCTGCTGATAAAAAGAGCCCAAATGGGAAGCTTCGTGTACTATACGAGGTATTTCCAATGTCATTTCTGATGGAACAAGCAGGAGGACAAGCATTTACTGGCAAGCAACGGGCACTGGATTTGATTCCTAAGAAGTTGCATGAACGATCTCCTATATTCCTCGGCAGTTATGATGATGTTGAGGAAATCAAAGCTCTTTATGCTGCTGAGGCCAAGTAG 1020 0.4431 MDHIADAQRTDLMTITRFVLNEQSKHPESRGDFTILLNHIVLGCKFVCSSVNKAGLAKLIGLAGETNVQGEEQKKLDVLSNEVFIKALISSGRTSILVSEEDEEATFVEASLRGKYCVVFDPLDGSSNIDCGVSIGTIFGIYMVKDVNEPTLEDVLQSGKNMLAAGYCMYGSSCTFVLTTGKGVNGFTLDPSLGEFILTHPDIKIPKKGKIYSVNEGNAMNWDGPTASYVERCKFPKDGSSPKSLRYIGSMVADVHRTLLYGGIFLYPADKKSPNGKLRVLYEVFPMSFLMEQAGGQAFTGKQRALDLIPKKLHERSPIFLGSYDDVEEIKALYAAEAK 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211571g00002 339 PRINTS Fructose-1,6-bisphosphatase signature 212 239 IPR028343 GO:0042132
Stsc211571g00002 339 PRINTS Fructose-1,6-bisphosphatase signature 310 335 IPR028343 GO:0042132
Stsc211571g00002 339 PRINTS Fructose-1,6-bisphosphatase signature 38 65 IPR028343 GO:0042132
Stsc211571g00002 339 PRINTS Fructose-1,6-bisphosphatase signature 75 101 IPR028343 GO:0042132
Stsc211571g00002 339 PRINTS Fructose-1,6-bisphosphatase signature 186 209 IPR028343 GO:0042132
Stsc211571g00002 339 PRINTS Fructose-1,6-bisphosphatase signature 155 178 IPR028343 GO:0042132
Stsc211571g00002 339 Hamap Fructose-1,6-bisphosphatase class 1 [fbp]. 13 336 IPR000146 GO:0005975|GO:0016791
Stsc211571g00002 339 FunFam Fructose-1,6-bisphosphatase class 1 204 337 - -
Stsc211571g00002 339 Gene3D - 204 339 - -
Stsc211571g00002 339 Pfam Fructose-1-6-bisphosphatase, C-terminal domain 205 334 IPR044015 -
Stsc211571g00002 339 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE-RELATED 4 336 IPR000146 GO:0005975|GO:0016791
Stsc211571g00002 339 SUPERFAMILY Carbohydrate phosphatase 8 334 - -
Stsc211571g00002 339 Pfam Fructose-1-6-bisphosphatase, N-terminal domain 13 201 IPR033391 -
Stsc211571g00002 339 ProSitePatterns Fructose-1-6-bisphosphatase active site. 276 288 IPR020548 GO:0005975|GO:0042578
Stsc211571g00002 339 Gene3D - 4 203 - -
Stsc211571g00002 339 PIRSF FBPtase 9 339 IPR028343 GO:0042132
Stsc211571g00002 339 CDD FBPase 20 334 IPR000146 GO:0005975|GO:0016791
Stsc211571g00002 339 FunFam Fructose-1,6-bisphosphatase, cytosolic 4 203 - -
Stsc211571g00002 339 PIRSF FBPtase_SBPase 9 339 IPR000146 GO:0005975|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211571g00002 Stsc-Chr211571 25947 29136 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Stsc211571g00002 FBPase 5e-81 CL0171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211571g00002 K03841 - oeu:111393268 639.417