Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211568g00003 ATGAACACAGCTACATTGAATGCCACAACTACGAGCTACGGACATGTGTCAAATAAAACGTTATGGATGTGTGAACAGTTTTCAAGGTCTGCGAGGTCAGGAGGGATATTCTTCGGTGATAACCCTTTGTCTTACACAATGCCAGTGCTTGTTCTTCAAAGCTCCGTTGTTGGATTGGTCACTACAACCTTAAAAATCCTATTTACCCCACTTGGCCAGAGTAGTTTTGTTCCCCAGATGCTGGGAGGCTTAGCACTGGGACCATCCATCCTGGGACGAATCAGTGCAGTAAGGAAGTATGTGTTTCCACCAAGAACCTTCTACGTGAGCGAGACCATCGCCTTTTTCGGCAGCATGATGTTCATGTTCCTCATAGGAGTCAAAATAGACCTGATGTCACTAATGAGAACCGGTAGAAAAACATGGGTCATCGCACTCTTGTCTTTTGCAATCCCAATTATTTTGACCTTAGTAGCCGCTATTATTCTCCGTAGACTATTCCTTCTCCCTCAAGAAAACCTTTACAATTCCATTTTCTACATCTCTTTCTTCTTATCCAGCTGTTCATTTCACTCCACCGCAAGCCATCTCGCAGATCTAAAACTCCTGAACTCCGAGATTGGTCGTTTGTCAGTTTCTTCCTCAATGATTTCTGGAACAATTTCTGGTGTTTTGGCGACTTCACTTTTCTCACATCATAGTTTGAGTAAGGATGTTAGCTCGTTTCGAATGATGATTTCGTTCCTTTTACTGGTGGCTTTCATAGTTTTTGTTTGTAGGCCAATTATGATGTGGATGATAAGGCGAACCCCGGAAGGAAAGCCTGTTAGGGAATCATACATAATCTTGATTTTCTTAATGTTGTTGTTATGTGCGTTGTTTAGTGAGCTTATTGGGGAGCATTTTATTATTGGGCCTATCCTTTTGGGCCTTGCTGTTCCTGATGGGCCACCTTTGGGCTCGGCGTTGAGTGAGAAGCTGGATGGTTTGGTTTCAGCAGTGTTTTTGCCGTTGTATTTTCTTTTCAGTGGGACAAGGTTCAACTCATTTGTACTTGAAGCAACGAGCTTTTCGGTTGTACAGGTTTTGGCTATAAGTAGCTTCTTTGGGAAGGTTTTGGGAGCAATGTTGCCTTCACTTTTTTGCAAGATGTCTTTGACTGATTCTCTTTCCTTAGGTCTTATCATGAGCGCACAAGGCATCACTCAATTGCTCTACTTACAAAGCTCTTTATACCTCAATATTATAGATACGCAAACATATGGGAATGTGGTGATATCAATCATATGGTTAACGGGAGCAACCTTACCTCTTGTGAAATTCCTATATGACCCTTCAAAGAGGTACTTAGCCATAAACCGAAGAAGAACCATTGAGCATGCATCTCCAGACGTTGAGCTTCTCCTCATGGCTTGTCTTCACAACGAAGAAAACACACCTTCCATGATCAACATTCTGGACATGTCAAACCCATCGGAACAAAGACCTATTTGCTTCTACGTCCTTCATCTCATTCAATTAACCGGAAGAGCAACACCTCTCTTCATCGACCACCAATCCAGTAGCAACAAATCTAGTTCCCTATACTCTTCCCATTCTCAACGCATGATCAACGCCTTCAGATCTTACGAGCAGCAGAATCAAGGCAAACTTGTTGTGAATCTCTTCACATCAATCTCCCCTTATGAAACAATGCATGACGAAGTTTGCATGCAAGCCGCGGAGCGTAGGGTATCCTTGCTCATCGTGCCGTTTCACAAGCGATGGAGTTCCAATGGAGTTGTAACGGAATCAACGCATTCAATTAGGGCTTTCAACCGTCAATTACTCAGAACCGCACCTTGTTCGGTTGCCATTCTCGTCGAGCGTGGAACGTTGAACAGGAACAATCCTTTAACATCTGTTTCCTTCTACAGCGTCGTTGTCGTGTTCATCGAAGGCTCCGACGACCGCGAATCCTTGGTTTATGCAATGCGAATGGCTGATCATCCTAATGTGAGTGTTACCGTGGTTAGGTTGATAGAGCCGAGAAGAAAAAGTAGGAACTTGATGATGAGAGATATAGATGGGGATTTGATTCATAGGTTTAAGGTGGAGTACTGTATTCAAATAAAAAGACATGATTATAGAGAAGAAGTGGCTAGGGATAGTGTTGAGATGATTAATGTGTTAAAGTCTTTTGATGGTTGTTTCGATTTGATTATGGTAGGTAGGCGCCATGCGAATCGTGAATTTTCATCATTGTTTAATGGGATGAATGAGTGGAATGAGTATCCTGAACTTGGTGTTGTAGGGGACATGCTTGTTTCTTCGGATTCTACTTACAATGGTTCTGTCATGGTGGTTCAGCAACAGATTTTAGGGTTTAGTGGTGGTGGCGGCGGCTGCTATGGCGGCGGTAGCGGTGGAGGCCACCATGGCGGTTATCATCATCCTGATTTTCATCCTGATTTCCATCATCTTAGGCAAGAAAGACCCCTTAACATTCCGGAAGTGCCACGAGATACAAGGGTGTGGCCAATGGTTTAA 2529 0.4334 MNTATLNATTTSYGHVSNKTLWMCEQFSRSARSGGIFFGDNPLSYTMPVLVLQSSVVGLVTTTLKILFTPLGQSSFVPQMLGGLALGPSILGRISAVRKYVFPPRTFYVSETIAFFGSMMFMFLIGVKIDLMSLMRTGRKTWVIALLSFAIPIILTLVAAIILRRLFLLPQENLYNSIFYISFFLSSCSFHSTASHLADLKLLNSEIGRLSVSSSMISGTISGVLATSLFSHHSLSKDVSSFRMMISFLLLVAFIVFVCRPIMMWMIRRTPEGKPVRESYIILIFLMLLLCALFSELIGEHFIIGPILLGLAVPDGPPLGSALSEKLDGLVSAVFLPLYFLFSGTRFNSFVLEATSFSVVQVLAISSFFGKVLGAMLPSLFCKMSLTDSLSLGLIMSAQGITQLLYLQSSLYLNIIDTQTYGNVVISIIWLTGATLPLVKFLYDPSKRYLAINRRRTIEHASPDVELLLMACLHNEENTPSMINILDMSNPSEQRPICFYVLHLIQLTGRATPLFIDHQSSSNKSSSLYSSHSQRMINAFRSYEQQNQGKLVVNLFTSISPYETMHDEVCMQAAERRVSLLIVPFHKRWSSNGVVTESTHSIRAFNRQLLRTAPCSVAILVERGTLNRNNPLTSVSFYSVVVVFIEGSDDRESLVYAMRMADHPNVSVTVVRLIEPRRKSRNLMMRDIDGDLIHRFKVEYCIQIKRHDYREEVARDSVEMINVLKSFDGCFDLIMVGRRHANREFSSLFNGMNEWNEYPELGVVGDMLVSSDSTYNGSVMVVQQQILGFSGGGGGCYGGGSGGGHHGGYHHPDFHPDFHHLRQERPLNIPEVPRDTRVWPMV 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211568g00003 842 Gene3D - 49 451 IPR038770 -
Stsc211568g00003 842 PANTHER CATION/H + ANTIPORTER 26 785 - -
Stsc211568g00003 842 Pfam Sodium/hydrogen exchanger family 56 432 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211568g00003 Stsc-Chr211568 4853 8430 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211568g00003 33 786 Antiporter Super Family AT2G13620 35.128 5.28e-155 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211568g00003 K26731 - mtr:11413669 906.746