Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211566g00008 ATGAGACTCTCTCTCTTCTCACTCTCACCCCACCGCCATTGTTACACCCTATTCACGCCCGCGTCTTCCGTACCCACTATCACAACAACCAGCCTCCGCTTCCCCCGCATGGACGCCTCCTTCCAACGCCGCAAAGACAAGGTCGTCGTCATCATGGGCGCCACCGGCTCCGGCAAATCCCGCCTCTCTCTCGACCTCGCCTCCCTCTTCTTCCCCTTCTCCGAACTCATCAATTCAGACAAAATGCAAGTCTACAACGGCCTCGATATCACAACCAACAAGATCCCCATTCACGACCGCAAAGGCGTCCCTCATCACCTCCTCGGCGACGTATCCCCTTCCCACGGCGACTTCACCCCCTCCGACTTCCGCCTCCGCGCCGGACAAATCATATCCGATATCACCTCCCGGAATAATCTCCCCATCGTCGTCGGCGGCTCCAACTCCTTCGTCCACGCACTCCTGGCGGAAAGATTCGACCCGGAGTTGAACGTGTTTGATGATGGTGACGCTGAGATATCGCCGGAGTTGAGATACGAGTGCTGCTTCCTGTGGGTGGATATCTCCTTCAATGTGTTGAGAGATTACTTGTTGAAGCGAGTGGACGACATGCTTGACTCAGGAATGGTGGAAGAGTTAGCTGAGTTCTTCGACCGGGACTCGCCCGATTTGGAACTCGACTCAGCCACCCGAACCGGTTTGAGAAAAGCCATTGGGGTGCCCGAGTTCGACCGCTTTTTTAAATTGTACCCTCCTGGTTGCAAGGATTCACTGCGGACGGGTGCATACCAGGAAGCCGTGAGGGCCATAAAGGATAACACGTGTCAGCTCGCTAAGAGGCAGATACAAAAGATCCACCGTTTAAAAGCTGCCGGATGGGACCTACGGAGGATAGACGCCACGGAGGCGTTTCGGGTGCTAATGACGTCAGGGCGTAACGGCGGAGACAGGTGGTCCGATGTGTGGGGGAGGGATGTGTTGGAACCAAGCGTGAAGATTGTGAGGCGCTTCTTGATGGAGTAG 1023 0.5572 MRLSLFSLSPHRHCYTLFTPASSVPTITTTSLRFPRMDASFQRRKDKVVVIMGATGSGKSRLSLDLASLFFPFSELINSDKMQVYNGLDITTNKIPIHDRKGVPHHLLGDVSPSHGDFTPSDFRLRAGQIISDITSRNNLPIVVGGSNSFVHALLAERFDPELNVFDDGDAEISPELRYECCFLWVDISFNVLRDYLLKRVDDMLDSGMVEELAEFFDRDSPDLELDSATRTGLRKAIGVPEFDRFFKLYPPGCKDSLRTGAYQEAVRAIKDNTCQLAKRQIQKIHRLKAAGWDLRRIDATEAFRVLMTSGRNGGDRWSDVWGRDVLEPSVKIVRRFLME 340
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Stsc211566g00008 340 Pfam IPP transferase 83 161 - -
Stsc211566g00008 340 Pfam IPP transferase 175 283 - -
Stsc211566g00008 340 Gene3D - 45 338 IPR027417 -
Stsc211566g00008 340 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 190 295 - -
Stsc211566g00008 340 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 219 IPR027417 -
Stsc211566g00008 340 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 45 338 IPR039657 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Stsc211566g00008 Stsc-Chr211566 75528 76550 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211566g00008 178 338 C2H2 Transcription Factor Family AT2G27760 29.787 7.06e-11 61.2
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211566g00008 K10760 - qsa:O6P43_032737 427.943