Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211565g00009 ATGAGAAATGAGCAACAAAAGCAGCACCCGGGAAAAGAAGAAGAACAAGAAGAAGAAGAAGAGGATTCTCAACTGCTAGAGTCACCATTGCCTCTCACTGTTACTTCCAGGGTATTGTATATGTTGGGAGACATAGCATCAGGGCCTGCGTTCAAGTTCACGCAATGGCTTCAATTGGTTCGTAAACGCACTTCAAAGTTTGGACCTTCTGGCTTCCCTAACCGCCTTTCCACCATGCCTTCTTTTAGCCCTGGTGAGGCTATCGAGGATGCAACGAGCGATCAGACTCCAAAACAAACTGAGGTCAACTTGTGGGAGAGGCTTGGTAAAGCTGAAATGTTGGATATTGAATCAAGCATGTTTTCCTGGGAGAGGCTCGCTTCGCTTCACCACACTGAACACAGCAGCATAAATGAAAATTCCGAGGATGAAATGAACAAAGCTCTTGAGGTAACTGTAAATTCTGGAGGGGTGGTCTTCTTTGCCTTTTTCAATGGCCTTGGGGGCGATAATGCTCTTCCGAAAGAAGCAGCGGCTGTTATAAAAATATCATCATCAAGATTGGCAACACAATCAGAACGCCTTGGTTATGAATTCGCTAGGTGGTTGGGAGTTCGAACTCCTCAGGCCAGAGTCATTCATAATACTAGTTCTGAGTGGCTCCAAATAAAGGAAGCTACAGAAAAAGCTAGAGATGCAGCAAGTTCTAAGGGTGATGAAAGTGGCGAAATGACTTGTTCGGAACTTTTGGAAGCACTTGAACTTGGCCGGTGTCTCTATTTTATGAGTTATGTACACGGTTCACCTTTGCTCGAAAGTTCCTCTGCATTTGAATCTCGGGAAATTGCAGAAAGAACATCAGCAGCCCTTGGCAGGGTATTGATGTTGGACCTTGTCATTAGAAATGAAGATAGGCTCCCTTGCCGCCAACTCAGATGGCGTGGAAACTCTGCAAATTTGTTGTTTGCTGAAAAGTTAATCTCTGCAAATACAGATACTTTAGGAGAAGCTATAGATTCTGCAATGAACCATTATGGACCAAGGGTGGTTCGAGCACTTCAAAATGACAGGAGGTCAGCTTCAATGGATTCCAAGCCTAGTTCTCGTAATCCTACATTGATATCACAACGCTCCGATGTTTCGGATATAGTGGAATCAGCAATATCTGCTAGGATGAGTCTTAATGGTCAAACATCAGCAGAATCACGGCTTACTAACTTTAACGTTGTGGCTATTGATTCTGGTGTTCCTCGCCGGCCCCCTACTGGAAAACGTGCAGATGATCAGACTAATTATCCCAAGTTGGTTGAGTTGCTACTTAACAGTTCCGAGTTTTCCTCGAACCTGCTATATGATATAACCGGAGGCAAATTAGGATGTTCGGCACCAGAAGACATATATCCGCCAACTGATGTGCCTGCAACTGCTAGTGACTTAACAGCAGTTCATGAGTTTCGTTGTAGTTTTCGCGCTGCTCTTAGGGATCTGCAGGGATTTTATATATTCCTACTGACCCTTCACCAGAAACTTGATAACATGTTAAGATTGCTTATGAATATTATAAGCAAAATATCATCTTTGGAGTCTGAAAAGGACGAATTTTCTTCGCCCATTGCTGTTGGTAGCAGTCCCTCTCCTTCTCCAACAAGTAGAGAAAGGTTTCCTCATGATAACCATCAAGATTTAAGTGATTCAGAATCACAAAAGACAGCTCCAAGGATATCATCATCGTCAGGTGGTAGAGATTGTTGTGACTCCGGCTCTGCATCAAGAGAAGGTTGTCATGGGAAGCACTCGAGAGGAAGCTCAGAACCACATAGTGGTCTTCGCATAACAGCTAAACTTCGTGACTTCAATAAATTTGCAAAGGTTGATGCCGAATCTAGTAAAGAATTGGAACAATGGAATGAAATGCTTAAAAATGAAGTCATCAAGTTATGCCAAGACAACAATTTCAATACAGGCTTTTTTGAGGGTAGTGAGGACAACTGTGTCATTGATGCATATGAACTGAAGGTAAGACTTGAGCATATCCTTGAGAGGATTGTGTTGATATCTGAGGCTGCGAATACGGAGAAACCCTCTGCCGTTACAAATACTCTTTATGTTGGTGGAGCACTGGCTGCAAGATCTGTATACACATTGCAACGCTTGGGAATCACGCATATATTGTGTTTGTGTACGAACGAAATCGGACAGGCCGATTCTCAGTTTCCTGATCTATTTACATATAAAAATTTCTCGGTGAGTGACAATGAAGATTGTAACATCAGCAGCATATTTGAAGAAGCTTGTGATTTTATAGACTATGTTGAGCAGATTGGTCAAAGAGTTTTAGTTCATTGTTTTGAGGGGAGAAGCAGAAGTGTTACTTTGGTCCTTGCTTACTTAATGCTCAGAAAGAAGTTCACTCTACTAGAAGCATGGACCACTTTGAAACGAGTACACCGTCGAGCACAGCCAAACGATGGTTTCGCAAAGATCTTACAGGAACTGGATAAAAAGCTGCACGGAAAGGTTTCTATGGAGTGGCAGCAACGGAAACCAACGATGAAAGTTTGCCCCATGTGTGGCAAGAATGCCGGATTAAGCAGCAGCTCACTTAAGCTCCATCTCCAAAAGTTCCATAAAAAGCTTTCGTCTGGGAGCGTTGACAGTGCCATGACAATGGAAATACAGAAGGCGCTGACAGCTTTGAAGATCAGCCGCGGCGGCAGTGTTAGCCCGATTCAGAGGCAGTCACAGTCAATGATAGATGAATAG 2763 0.4332 MRNEQQKQHPGKEEEQEEEEEDSQLLESPLPLTVTSRVLYMLGDIASGPAFKFTQWLQLVRKRTSKFGPSGFPNRLSTMPSFSPGEAIEDATSDQTPKQTEVNLWERLGKAEMLDIESSMFSWERLASLHHTEHSSINENSEDEMNKALEVTVNSGGVVFFAFFNGLGGDNALPKEAAAVIKISSSRLATQSERLGYEFARWLGVRTPQARVIHNTSSEWLQIKEATEKARDAASSKGDESGEMTCSELLEALELGRCLYFMSYVHGSPLLESSSAFESREIAERTSAALGRVLMLDLVIRNEDRLPCRQLRWRGNSANLLFAEKLISANTDTLGEAIDSAMNHYGPRVVRALQNDRRSASMDSKPSSRNPTLISQRSDVSDIVESAISARMSLNGQTSAESRLTNFNVVAIDSGVPRRPPTGKRADDQTNYPKLVELLLNSSEFSSNLLYDITGGKLGCSAPEDIYPPTDVPATASDLTAVHEFRCSFRAALRDLQGFYIFLLTLHQKLDNMLRLLMNIISKISSLESEKDEFSSPIAVGSSPSPSPTSRERFPHDNHQDLSDSESQKTAPRISSSSGGRDCCDSGSASREGCHGKHSRGSSEPHSGLRITAKLRDFNKFAKVDAESSKELEQWNEMLKNEVIKLCQDNNFNTGFFEGSEDNCVIDAYELKVRLEHILERIVLISEAANTEKPSAVTNTLYVGGALAARSVYTLQRLGITHILCLCTNEIGQADSQFPDLFTYKNFSVSDNEDCNISSIFEEACDFIDYVEQIGQRVLVHCFEGRSRSVTLVLAYLMLRKKFTLLEAWTTLKRVHRRAQPNDGFAKILQELDKKLHGKVSMEWQQRKPTMKVCPMCGKNAGLSSSSLKLHLQKFHKKLSSGSVDSAMTMEIQKALTALKISRGGSVSPIQRQSQSMIDE 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211565g00009 920 MobiDBLite consensus disorder prediction 591 609 - -
Stsc211565g00009 920 MobiDBLite consensus disorder prediction 552 566 - -
Stsc211565g00009 920 Gene3D Protein tyrosine phosphatase superfamily 675 848 IPR029021 -
Stsc211565g00009 920 SMART dsp_5 693 835 IPR020422 GO:0006470|GO:0008138
Stsc211565g00009 920 CDD DSP 694 831 - -
Stsc211565g00009 920 MobiDBLite consensus disorder prediction 567 584 - -
Stsc211565g00009 920 MobiDBLite consensus disorder prediction 357 376 - -
Stsc211565g00009 920 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 692 838 IPR029021 -
Stsc211565g00009 920 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 762 814 IPR000387 GO:0016311|GO:0016791
Stsc211565g00009 920 ProSiteProfiles Dual specificity protein phosphatase domain profile. 693 838 IPR020422 GO:0006470|GO:0008138
Stsc211565g00009 920 MobiDBLite consensus disorder prediction 536 551 - -
Stsc211565g00009 920 FunFam Dual specificity protein phosphatase PHS1 665 839 - -
Stsc211565g00009 920 Pfam Dual specificity phosphatase, catalytic domain 701 833 IPR000340 GO:0008138|GO:0016311
Stsc211565g00009 920 Gene3D - 269 401 IPR036940 -
Stsc211565g00009 920 Pfam Actin-fragmin kinase, catalytic 101 416 IPR015275 -
Stsc211565g00009 920 MobiDBLite consensus disorder prediction 356 376 - -
Stsc211565g00009 920 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 18 919 IPR035010 GO:0004721|GO:0009737|GO:0043622
Stsc211565g00009 920 SUPERFAMILY Protein kinase-like (PK-like) 55 429 IPR011009 -
Stsc211565g00009 920 MobiDBLite consensus disorder prediction 1 28 - -
Stsc211565g00009 920 MobiDBLite consensus disorder prediction 535 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211565g00009 Stsc-Chr211565 64532 69392 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211565g00009 15 904 Protein tyrosine phosphatase (PTP) family AT5G23720 61.826 0.0 1078
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211565g00009 K14165 - gmx:102661225 1276.92