Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211565g00008 ATGATTGTTGGAAAGCGACTTTGCGAGGTTAAGGCAAAGAAGTGTTTGAAAGTCTTTACTAACTACACGCATGTTTTAGAGGAACTCACAGTGGGAGATGCAATTCCTTTTCTAAGATGGCTAGATTTGGGTGGTCATAAAAAAGTCCTAAGAGAAGTTTCAAAAGAAGTGGACAAGATTTTGAATGAATGGTTAGATGAGCATAGAAAGAAAATGGATTATGAGGATGGAAAGGAAGCAACAAGTTATGAACAAGACTTCATAGATGCCATGCTTTCAAGTCTCTCTCATGGAAAGATTGATGGATTTGATGCTGATACCATATGCAAAGCAACCATATCGAGTGTTTTTGTGGGAGCTATTGATACCACACCGGCTACTCTTACATGGGCAATGTGTCTGTTATTAAGAAATCCAAGTGTGCTAGAAAAAGCAAAAGAAGAACTTGACAAGAAAATTGGGAAAGAAAGGTGCATAAATGAATTAGATATAAATCAATTAGTATATATCCAAGCCATAGTCAAAGAAACATTAAGATTGTATCCATCAGTTCCTTTTCCACCTCGTAAATTCGCAGAGAATATCAATTTAGGTGGATATAATATAGAAAAAGGTACTATACTATTCACAAATGTTTGGAAAATCAACACTGATTCTAGTGTTTGGCCAGATTGCTTAGAATTCAAGCCAGAAAGATTTCTGACAACACACAAAGATGTTGATTTTAGGGGTCAACATTTTGATTTCTTACCATTTGGAAGTGGTAGAAGAATGTGTCCTGGAATTTCCTTTGGAATTCAAATAATTTATTTCATTCTGGCTAGCTTTTTACATTCTTTTGAAATCTCTTCTATGGAACATGTTGATATGACTGGAATTCAAGGAGGGGTTTATGCTAAAGCTACTCCACTTAAGGTTATGATTAAACCACGTTTGTCTCCTAATTGCTATGAAACTGTGTAA 963 0.3531 MIVGKRLCEVKAKKCLKVFTNYTHVLEELTVGDAIPFLRWLDLGGHKKVLREVSKEVDKILNEWLDEHRKKMDYEDGKEATSYEQDFIDAMLSSLSHGKIDGFDADTICKATISSVFVGAIDTTPATLTWAMCLLLRNPSVLEKAKEELDKKIGKERCINELDINQLVYIQAIVKETLRLYPSVPFPPRKFAENINLGGYNIEKGTILFTNVWKINTDSSVWPDCLEFKPERFLTTHKDVDFRGQHFDFLPFGSGRRMCPGISFGIQIIYFILASFLHSFEISSMEHVDMTGIQGGVYAKATPLKVMIKPRLSPNCYETV 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211565g00008 320 PRINTS P450 superfamily signature 172 183 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211565g00008 320 PRINTS P450 superfamily signature 119 136 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211565g00008 320 PRINTS P450 superfamily signature 250 259 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211565g00008 320 PRINTS E-class P450 group I signature 128 154 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211565g00008 320 PRINTS E-class P450 group I signature 108 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211565g00008 320 PRINTS E-class P450 group I signature 249 259 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211565g00008 320 PRINTS E-class P450 group I signature 259 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211565g00008 320 PRINTS E-class P450 group I signature 211 235 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211565g00008 320 PRINTS E-class P450 group I signature 171 189 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211565g00008 320 SUPERFAMILY Cytochrome P450 16 311 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211565g00008 320 Gene3D Cytochrome P450 1 315 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211565g00008 320 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 252 261 IPR017972 GO:0005506|GO:0016705
Stsc211565g00008 320 PANTHER CYTOCHROME P450 82C3-RELATED 1 317 - -
Stsc211565g00008 320 Pfam Cytochrome P450 4 295 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211565g00008 Stsc-Chr211565 50368 51829 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211565g00008 11 317 Cytochrome P450 AT4G31970 43.131 5.91e-86 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211565g00008 - - aip:107643961 396.741