Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211565g00005 ATGGGAATCCTGTTTTTCATTACCACCCTAATAATCTATGCTCTTTTCTTCCGTTCCTTCAAAGTTGGTCATCATCACAATAAGCATAATAAAGAACCTCCTATGGTGGATGGTGCATGGCCTATACTCGGTCACCTTCCACTCTTGCGCGGTTCTACTTCCTCAAAACCACTTCACAAAGCTTTAGACGCCATAGCCGACGAATACGGACCCCTTTTCACGATGAAGCTTGGTTCTAGAAAGGTGGTAGTGTTAAGCAACTCAGAAATGGCCAAAGAATGCTTCACAAAGAATGATTCTTTTGTTTCTTCTCGTCCTAATCTCGCCTCGTTTGAAATTCTTGGCTACAATAGAGCCATGTATGTTTTCACGCCATACGGTTCGTATTGGCGCGAACTTCGCAAGATCATGAACACACAGCTCCTCTCGAACCAAAGAATAGAGCAACTAAGCCATAATGAGTCTGGCTATGTGTTGGTGGACATAAAACAATGGTTCAGAGAATTGATATTCAATATTGTTCTCAGAACGATTCTTGGAAAGCGTTTCTTTGGCCCTATGGATTTGGAGGGCGAGGTTAAGGCGAAGAAGGGTTTCAAAGCTATTACTGAGTTCTTGCATGTTATGGAGGAATTCACATTGAGAGATGCTATTCCTTCTCTAGGGTGGTTAGATTTTGGGGGTCGCGAAAAAGTCATGAAAGAAGTTGCAAAAGAAATGGACAAGGTTTTGAGTGAATGGTTAGATGAGCATAGAAAGAAGATGGACTCTGAAGATGGAAAGAAAGTAGCAAGTTATGAACAAGACTTCATTGATGTCATGCTTTCAAGTCTCTCTCATGGAAAGATTGATGCCTTTGATGTTGATACCGTAATCAAAGCCACCACATTGAATGTTATTTTGGGAGGAATTGATACGTCATCGGTTACTCTTACATGGGCAATGTGTCTCTTATTAAGAAATCCAAGTGTGCTAGAAAAAGCAAAAGAAGAACTTGAAAAAAAAATTGGGAAAGAAAGGTGGATAAATGATTCAGATATAAATAAATTACTATACATTCAAGCTATAGTCAAAGAGACATTAAGATTATATCCACCAGCTCCTGTTCTAGCTCGTGAATTCACAGAGAATATCAATTTAGGAGGATATGATATCGAAAAAGGGACTATACTACTTACAAATGTTTGGAAAATCAACACTGATCCTAGTGTTTGGTTAGATTGCACAGAGTTCAAGCCAGAAAAATTTCTAACAACTCACAAAGATGTTGATTTTAGGGGTTATCATTTTGATTTGTTACCATTTGGAAGTGGTAGAAGAATGTGCCCTGGAGTTCCCTTTGGAGTTCAAATGATGCACTTTATTCTAGCTAGCTTCTTGCATTCTTTTGAAATCTCTTCTATGGAATATGTTGATATGACTGGAACTCTTGGAGCTGTTTATGCTAAAGCTACTCCACTTAAGGTTATGATTAAACCACGTTTGTCTCCTAATTGCTATGAAATTATGTAA 1512 0.3856 MGILFFITTLIIYALFFRSFKVGHHHNKHNKEPPMVDGAWPILGHLPLLRGSTSSKPLHKALDAIADEYGPLFTMKLGSRKVVVLSNSEMAKECFTKNDSFVSSRPNLASFEILGYNRAMYVFTPYGSYWRELRKIMNTQLLSNQRIEQLSHNESGYVLVDIKQWFRELIFNIVLRTILGKRFFGPMDLEGEVKAKKGFKAITEFLHVMEEFTLRDAIPSLGWLDFGGREKVMKEVAKEMDKVLSEWLDEHRKKMDSEDGKKVASYEQDFIDVMLSSLSHGKIDAFDVDTVIKATTLNVILGGIDTSSVTLTWAMCLLLRNPSVLEKAKEELEKKIGKERWINDSDINKLLYIQAIVKETLRLYPPAPVLAREFTENINLGGYDIEKGTILLTNVWKINTDPSVWLDCTEFKPEKFLTTHKDVDFRGYHFDLLPFGSGRRMCPGVPFGVQMMHFILASFLHSFEISSMEYVDMTGTLGAVYAKATPLKVMIKPRLSPNCYEIM 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211565g00005 503 Pfam Cytochrome P450 37 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211565g00005 503 PANTHER CYTOCHROME P450 82C3-RELATED 12 500 - -
Stsc211565g00005 503 Gene3D Cytochrome P450 20 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211565g00005 503 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211565g00005 503 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211565g00005 503 PRINTS E-class P450 group I signature 169 187 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211565g00005 503 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211565g00005 503 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211565g00005 503 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211565g00005 503 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211565g00005 503 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211565g00005 503 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211565g00005 503 SUPERFAMILY Cytochrome P450 39 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211565g00005 503 FunFam Cytochrome P450 82C4 150 492 - -
Stsc211565g00005 503 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211565g00005 503 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211565g00005 503 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211565g00005 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211565g00005 Stsc-Chr211565 28038 30458 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211565g00005 34 500 Cytochrome P450 AT4G31970 43.030 1.15e-142 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211565g00005 - - adu:107490967 592.423