Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211565g00001 ATGGACAGGGCTTCAATATTAGGGGATGCAATTGAATATCTGAAGGAACTGCTGCAGAGGATCAATGAGCTCCATAATGAATTGGAATCATCAACCACAACAACTACTTCTGGTGGTGGTAGCACTGGTGGTTCACTCACACCAATACTACCACCGCCGCCGCCACCACCACCACTAGTAGCATCATCATCAAGCTTCCATCCATTGACACCAACTCCACCATCACTTCCAACCCGCATTAAAGAAGAGATTTGCCCCACTTCCTCTCTGCCTAGTCCCAATGCTCAACCTCCTAAGGTTGAGGTGAGGTTGAGGGAAGGAAGGGCAGTGAACATCCACATGTTTTGTAGTCGGAAAGCAGGGCTTTTGGTGTCAACAATGAGGGCATTGGATTCACTTGGCTTAGACATTCAGCAAGCTGTTATCAGCTCTTTCAATGGTTTTGCTATGGACATTTTCAGAGCCGAGCATTGCAAAGAAGGTCAAGATGTGCATCCAGAGCAGATAAAGGCAGTACTCTTGGATACAGCTGGGTACCCTGCCATCATCTAA 552 0.4728 MDRASILGDAIEYLKELLQRINELHNELESSTTTTTSGGGSTGGSLTPILPPPPPPPPLVASSSSFHPLTPTPPSLPTRIKEEICPTSSLPSPNAQPPKVEVRLREGRAVNIHMFCSRKAGLLVSTMRALDSLGLDIQQAVISSFNGFAMDIFRAEHCKEGQDVHPEQIKAVLLDTAGYPAII 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211565g00001 183 Coils Coil 7 34 - -
Stsc211565g00001 183 MobiDBLite consensus disorder prediction 28 99 - -
Stsc211565g00001 183 MobiDBLite consensus disorder prediction 47 62 - -
Stsc211565g00001 183 MobiDBLite consensus disorder prediction 28 44 - -
Stsc211565g00001 183 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 179 - -
Stsc211565g00001 183 CDD ACT_UUR-ACR-like 112 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211565g00001 Stsc-Chr211565 3183 5100 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211565g00001 1 156 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 66.026 1.71e-63 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211565g00001 - - ahf:112772589 263.462