Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211564g00020 ATGGCTATGAGAAAATCAAGTAGCAGGCTAATTGGTGGTCAAACAAGAATGATTAAGCAAATGGTGAAGAGATGGTCCAGTTTGGGAAGGAAACAGCAACAAGAGCAGCAAGGAGAGGACGTTCCAAAGGGTCACTTTGTAGTTTATGTTGGTGGAGTTGGAGAGAAGAGAAGCAGGTACATTCTTCCAATCTCCTTCCTCACCACACCACAGTTTCAGATCCTCCTTCATCAGGCTGAAGAAGAGTTTGGATTTCATCACCAAATGGGTCTTACCATTCCTTGTCAACAACATGTTTTTGAGTCTCTTACTTCCATGCTCAGATAG 327 0.4312 MAMRKSSSRLIGGQTRMIKQMVKRWSSLGRKQQQEQQGEDVPKGHFVVYVGGVGEKRSRYILPISFLTTPQFQILLHQAEEEFGFHHQMGLTIPCQQHVFESLTSMLR 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211564g00020 108 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 34 106 IPR003676 GO:0009733
Stsc211564g00020 108 Pfam Auxin responsive protein 18 107 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211564g00020 Stsc-Chr211564 99258 99584 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211564g00020 33 103 Calmodulin-binding Proteins AT3G43120 45.070 1.32e-16 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211564g00020 K14488 - pvy:116128449 139.813