Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211564g00018 ATGTCTTCAACAACCGGCATCGGAAAATGCAGCAAGATCCGCCACATTGTGTGGCTCCGCCAGATGCTCCGCCGCTGGCGCAATAAGGCCCGTAAACGCACGCCCTCCGATGTCCCCTCGGGACACGTGGCAGTGTGCGTGGGCACCAACTACACGAGATTCGTGGTGCGCGCCACACACCTGAACCACCCGGTGTTCAAGAAGCTTCTGTTCCAGGCGGAGGAAGAGTACGGATTCTCGAACCACGGCCCCCTCGCGATTCCGTGCGAGGAAGCCGTGTTCAAAGAGGTGATCCGGTTCATTTCCCGATCTGACTCAGCATCCAGCCGGTTCGCTAACCTGGAGGACCTCCAGAGGTACTGCCACGCTGGCAGCATCCGTGCCAACCTGGACTTCTGGACAGATTCCATGCCGTTACTCACTAACAACTAA 432 0.5833 MSSTTGIGKCSKIRHIVWLRQMLRRWRNKARKRTPSDVPSGHVAVCVGTNYTRFVVRATHLNHPVFKKLLFQAEEEYGFSNHGPLAIPCEEAVFKEVIRFISRSDSASSRFANLEDLQRYCHAGSIRANLDFWTDSMPLLTNN 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211564g00018 143 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 23 97 IPR003676 GO:0009733
Stsc211564g00018 143 Pfam Auxin responsive protein 20 100 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211564g00018 Stsc-Chr211564 87406 88397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211564g00018 7 140 Calmodulin-binding Proteins AT4G34750 50.345 2.72e-43 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211564g00018 K14488 - qsa:O6P43_018667 217.624