Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc211564g00007 | ATGGTCCTCTCCATTCGCCGCCTCGCTGATGGATCCATTGAAGAGGCCACCTTTCGCAAAGAAGCAGAGTCATTAGGGAAAGTAAAGCACCGAAATCTAACTGTTCTTCGTGGATACTACGCAGGAGCACCCGATGTGAGGCTCCTTGTGTATGATTACATGCCAAATGGGAACTTAGGAACATTGCTCCAGGAAGCTTCACAACAAGACGGGCACGTGCTGAATTGGCCAATGCGGCACCTCATTGCACTTGGCATTGCTAGAGGACTAAGTTTCTTGCACTCAGTGCCAATTGTTCATGGTGATGTGAAGCCTCAGAACGTTCTCTTTGATGCAGATTTCGAAGCTCATTTGTCCGAATTCGGGTTAGATAGATTAAGCATAGCAGCATCAGCAGCAGTGGAAGCCTCATCATCTTCAACCCCAGTTGGTAGCTTAGGGTATGTGTCACCGGAGGCAGCATTAACGGGGCAAGCAACGAAGGAAGCAGATGTATACAGCTTTGGGATTGTGTTGTTGGAGATTCTGACAGGGAAGAAACCAGTGACGTTTACACAAGATGAGGACATTGTGAAGTGGGTGAAGAAGCAATTGCAAAGGGGACAGATTTCAGAGTTGTTGGAACCTGGTTTGCTTGAGATAGATCCTGAATCTTCAGAGTGGGAAGAGTTCTTGTTGGGTATTAAGGTGGCTCTGTTGTGCACAGCACCTGACCCTCTTGATCGCCCTTCCATGCCTGACATTGTTTTCATGCTCGAAGGTTGTCGTGTCGGACCGGAGATACCTTCCTCCGCCGATCCTACAACACTGCCTTCCCCTGCATGA | 825 | 0.4861 | MVLSIRRLADGSIEEATFRKEAESLGKVKHRNLTVLRGYYAGAPDVRLLVYDYMPNGNLGTLLQEASQQDGHVLNWPMRHLIALGIARGLSFLHSVPIVHGDVKPQNVLFDADFEAHLSEFGLDRLSIAASAAVEASSSSTPVGSLGYVSPEAALTGQATKEADVYSFGIVLLEILTGKKPVTFTQDEDIVKWVKKQLQRGQISELLEPGLLEIDPESSEWEEFLLGIKVALLCTAPDPLDRPSMPDIVFMLEGCRVGPEIPSSADPTTLPSPA | 274 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc211564g00007 | 274 | ProSiteProfiles | Protein kinase domain profile. | 1 | 261 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc211564g00007 | 274 | FunFam | LRR receptor-like serine/threonine-protein kinase RPK2 | 54 | 260 | - | - | |
Stsc211564g00007 | 274 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 53 | - | - | |
Stsc211564g00007 | 274 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 98 | 110 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc211564g00007 | 274 | SUPERFAMILY | Protein kinase-like (PK-like) | 13 | 263 | IPR011009 | - | |
Stsc211564g00007 | 274 | Gene3D | Transferase(Phosphotransferase) domain 1 | 54 | 260 | - | - | |
Stsc211564g00007 | 274 | Pfam | Protein tyrosine and serine/threonine kinase | 14 | 199 | IPR001245 | GO:0004672|GO:0006468 | |
Stsc211564g00007 | 274 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 14 | 255 | - | - | |
Stsc211564g00007 | 274 | SMART | serkin_6 | 2 | 251 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc211564g00007 | Stsc-Chr211564 | 40424 | 41317 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc211564g00007 | 1 | 274 | Receptor kinase-like Gene Family | AT4G36180 | 78.182 | 2.20e-147 | 439 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VII-3 | Stsc211564g00007 | PK_Tyr_Ser-Thr | 1.4e-31 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc211564g00007 | - | - | jre:108991311 | 491.115 |