Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211561g00009 ATGGAACCCTGCCACAACCCACCGCAACTATCCGTCACCGACAGCACCACCAGCATGCTCACCGACTTTGCCTGGATCGGAGGAGAGGAAGGCGACACCATGTGCCTGCCGCCGGAGAACGACAACAACAACAACAACAATAATCAATCGCTGTCTTCAAGCTCAGGTGAGGGTCCGCCGGAGAGTTCGATCGCCTCCGACGAGAAACAACTTGAGAAACAGAAACCACCGAATAGAAGTAAGAAGAAGCAGAATCGAATGAAGCAGCCACGGTTTGCTTTTATGACTAAGAGCGAAACCGATCATCTTGAAGATGGCTATAGATGGCGAAAGTACGGCCAGAAGGCAGTCAAAAATAGTCCATTTCCCAGGAGCTACTATCGTTGCACAAACAACAACTGCAGTGTGAAGAAAAGGGTGGAGCGCTCCTCGGAGGACCCAACTATTGTAATCACCACATATGAAGGCCAACACTGCCACCACTCGGCAGGGACATTCCACCACCACCGACACCTAAGTGCCATGATTAGTAGTAGTAATCATAAAGCCGCATTTGCAACTCATCAATTCTCTCTTGCAAATATGTCACACTTCTATCATCCAATTAATCATTTACCTGAAGAAAACACTACACTTATTACTACTAGTGTTTCTGACCCTTATTGCCAATCATCCCACAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATTACGATGGAAGCAGCAGCATTACATTGGCAGATTCATCAAACCCAGAAGAGCTACCCACAGATGATGGACTACTCGGAGATATTCTTGTGCCTAGGCAAATGCGTAACGGATGA 840 0.4476 MEPCHNPPQLSVTDSTTSMLTDFAWIGGEEGDTMCLPPENDNNNNNNNQSLSSSSGEGPPESSIASDEKQLEKQKPPNRSKKKQNRMKQPRFAFMTKSETDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNNNCSVKKRVERSSEDPTIVITTYEGQHCHHSAGTFHHHRHLSAMISSSNHKAAFATHQFSLANMSHFYHPINHLPEENTTLITTSVSDPYCQSSHNNNNNNNNNNNNNNNNYDGSSSITLADSSNPEELPTDDGLLGDILVPRQMRNG 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211561g00009 279 ProSiteProfiles WRKY domain profile. 98 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211561g00009 279 Pfam WRKY DNA -binding domain 104 160 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211561g00009 279 Gene3D WRKY domain 90 156 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc211561g00009 279 SMART WRKY_cls 103 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211561g00009 279 FunFam WRKY transcription factor 57 89 163 - -
Stsc211561g00009 279 MobiDBLite consensus disorder prediction 1 93 - -
Stsc211561g00009 279 MobiDBLite consensus disorder prediction 218 257 - -
Stsc211561g00009 279 MobiDBLite consensus disorder prediction 8 22 - -
Stsc211561g00009 279 MobiDBLite consensus disorder prediction 218 279 - -
Stsc211561g00009 279 MobiDBLite consensus disorder prediction 37 61 - -
Stsc211561g00009 279 SUPERFAMILY WRKY DNA-binding domain 95 161 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc211561g00009 279 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 43 238 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211561g00009 Stsc-Chr211561 35053 39074 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211561g00009 46 164 WRKY Transcription Factor Family AT1G69310 71.429 1.13e-56 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc211561g00009 WRKY 6e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211561g00009 - - gmx:100170676 215.698