LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc211560g00004	ATGGTTAGCTGTTGTGAACAGACATTGATGTATACTGGTATTGGATATAGCTCTCTTACTTTGGCTTCAGCTATGGTGGATCTCACTCCAGCTTTCACCTATATTGTTGCTCTCATTTCCCGGTTGGAAAAGCTTAACATGAAACTACGGAGTGGCAAGGCAAAAAGCATTGGCACCGTGTTCTCAATCGTAGGGGCATTGGTGGTGACCATACACCAAGGCTTCCCATTAACAAGTAACGGTGGTGGTTCGCTGCATAACCTGTCGGATGAAGACTTGTCGGACTGGGTGCTTGGAGGATTCCTTCTCTCGGCCGGTAGCTTTTGTCTTTCACTCGTCTTCATTGTCAAGACATGGATTATCAAGGATTACCCTGAAGAGTTAATGGTGGCAACAATTTCTTGTAGCTTTGTGATCATCCTTTCCAGTATAGTAGCTCTGATTGTTGATTCAAGTGCAAAAACATGGTTGCTCAAACCTGATACAGGGTTGATAGCTATAGTATATTCAGGAATATTTGTTGTGTCATTGCGTAGCATTGTGCATATATGGGCATGTAGAAAGAGAGGCCCTGTGTATGTTGCTATGTTCAATCCTCTAGGGATGGTGATTTCACTTGCCATGAGTGTCACATTTCTTAAGGACACCCTTTATCTAGGAAGCATAATTGGAGCGGTTGTTATAGCTCTTGGGTTTTATGGCGTGATATGGGGGCAGGATCAAGAAGAAAAGATGGTGGATGAGAAAGTTTATGGAAGATGTGACTCTGTGTCATCATCTTCCTCTACAACTCCTTTGTTGCAGAACAAGAGCATTCGTGTATAA	825	0.4303	MVSCCEQTLMYTGIGYSSLTLASAMVDLTPAFTYIVALISRLEKLNMKLRSGKAKSIGTVFSIVGALVVTIHQGFPLTSNGGGSLHNLSDEDLSDWVLGGFLLSAGSFCLSLVFIVKTWIIKDYPEELMVATISCSFVIILSSIVALIVDSSAKTWLLKPDTGLIAIVYSGIFVVSLRSIVHIWACRKRGPVYVAMFNPLGMVISLAMSVTFLKDTLYLGSIIGAVVIALGFYGVIWGQDQEEKMVDEKVYGRCDSVSSSSSTTPLLQNKSIRV	274

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc211560g00004	274	PANTHER	WAT1-RELATED PROTEIN	4	249	IPR030184	GO:0016020\|GO:0022857
	Stsc211560g00004	274	Pfam	EamA-like transporter family	99	236	IPR000620	GO:0016020
	Stsc211560g00004	274	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	141	240	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc211560g00004	Stsc-Chr211560	60121	63872	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc211560g00004	1	269	Nodulin-like Gene Family	AT3G28050	38.628	8.84e-65	205

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc211560g00004	-		-	qsa:O6P43_025326	327.02