Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211560g00003 ATGGTGAACCAAAATGTGGTTCCATTTGTGGGAATGGTGATGGTTGTTATGTCACAGAGTGGTGGAATGGTGATAAACAAAGCTGCCATGAGTGATGGAATGAATAAGTATGTCATGCTTCTCTATGCTTATCTCATCTCCACCTTCCTGCTTCTCCCCTTTCCAATCCTTCACTATTTCAGATCTGATGAGCATACTACTCCTCTCACGTTCTCCTCGCTGTGGAGCTTCTTTTTGCTTGGTTTGATTGGATGCTCAGGGCAGATATTGAGTTATCTTGGGATAGAACTTAGTTCACCTACTCTTGCTTCTGCCATGCTTAACCTCATCCCTGCTTTCACTTTTATACTAGCTCTTATTTTCAGGATGGAAGAAGCATGTTGGAAAGATTCGAGGACTCAAGCTAAAGTGTTAGGCACGGCAGTGTCAATTGAAGGAGCATTTGTTGTGATATTTTTCAAGGGCCCAGCAATCTTGAATAATACACACTCCACACTCTCACTTCAATTTTCACAGCAAGTGAATTGGATCTTAGGAGGATTCTTCTGTGCTTGTGATTCTTTCCTAGGTGCCCTCTGGTACATTTATCAGACTTCACTATCAAAGAAATACCCAGCATTAATGGTGATGACGTTCTTCCAGAGCTTATTCTCAACCTTGGAGTGTGGATTATTTGCCGTGTTTGCAGTTAGAGATGAAGAGGCATGGTTGCTGAAGAATTATACGGGTTGGCTTGCCATGCTATATCAGGCAATAGGTGCAAACGTGATAAGGTTCATCCTATTGACATGGTGCGTGAGAAGAGCAGGGCCTCTGTTTTGCTCCATGTTTAAGCCTGTGGGAATCATCTTCACCGTTTTCATGGGTTCAATCTTCTTGGGGGATCATTTTTACCTTGGAAGTTTGATTGGTGCGGTTCTAATCGTAATAGGGTTTTATGTTGTGATGTGGGGAAAGGCTACCCAAGAGAACAAGGTTGAAATTCACTACTTGGAATCTGCATCTTATAATACTAACAATAATGTTCCCCTATTGCAAAGTGGAAGTCCACCTCAAAGTGGAATAACATCACAATTTTAA 1080 0.4185 MVNQNVVPFVGMVMVVMSQSGGMVINKAAMSDGMNKYVMLLYAYLISTFLLLPFPILHYFRSDEHTTPLTFSSLWSFFLLGLIGCSGQILSYLGIELSSPTLASAMLNLIPAFTFILALIFRMEEACWKDSRTQAKVLGTAVSIEGAFVVIFFKGPAILNNTHSTLSLQFSQQVNWILGGFFCACDSFLGALWYIYQTSLSKKYPALMVMTFFQSLFSTLECGLFAVFAVRDEEAWLLKNYTGWLAMLYQAIGANVIRFILLTWCVRRAGPLFCSMFKPVGIIFTVFMGSIFLGDHFYLGSLIGAVLIVIGFYVVMWGKATQENKVEIHYLESASYNTNNNVPLLQSGSPPQSGITSQF 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211560g00003 359 Pfam EamA-like transporter family 179 316 IPR000620 GO:0016020
Stsc211560g00003 359 Pfam EamA-like transporter family 13 151 IPR000620 GO:0016020
Stsc211560g00003 359 PANTHER WAT1-RELATED PROTEIN 7 329 IPR030184 GO:0016020|GO:0022857
Stsc211560g00003 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 320 - -
Stsc211560g00003 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211560g00003 Stsc-Chr211560 54667 58701 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211560g00003 3 324 Nodulin-like Gene Family AT5G40240 40.060 9.12e-75 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211560g00003 - - gmx:100816194 395.201