Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211560g00002 ATGGCGACGAGAGTAGTGGGAATTAGCATAATCGCCGCAATGATCTCAGTTCAGTTCTTGGAGGTTGGATTGAACACTCTAGTCAAATCCGCCACTACCAACGGAATGAGCGACTATGTCTTCGTTTTCTATTCAAACCTTCTCGCATTCTTCTTGCTTCTCCCAACCACTTTCTTCTATTACAGAAATGCCCCTCCTCCTCTTCCTATCCCAACCTCAATCCTCTGTAGAGTCTTCCTCCTTAGTTCTCTCAGTACTGCGGTGCAGACGCTGATGTACACCGGTATTGGATACAGCTCTCCTACTTTGTGTTCTGTCATGGTGGATCTGGTCCCTGCTTTCACTTTTATTCTTGCCATTTTCTCCAGGATGGAAAATCTGAATATGAAACGACATAGCAGCTATGCAAAAATTATTGGGACAATAGTGTCCATTGCAGGCGCATTAATTGTGACCTTATATAAAGGGATGCCATTGACTAGTACTAGTGGTTTATTGCCAAATAAAATTGGATCTTTTTATCTATCAGCAGATTCAAACTCAAACTGGATACTCGGTGGTTTTCTTCTTGCAATTGCTAGCTTTTGCCTTTCAGTCTTGATTGTTGTTCAGACATGGATTATGAAGGATTATCCTGAAGAACTTGCAGTAACAACCACTGCTTGTGGTTTTGTTGTAGTCCTATCCGCCATAGTAGGTATGGTTGGAGAGCATAATAAAAAAGCTTGGATACCTAAGCCTGATATCCAATTGTTATGCATATTTTATTCGGCAATATTTGTGGTATCAACACGAAGCGTGGTGATAGCATGGGCTTGCCGTAAGAAAGGTCCAGTGTATGTAGCAATGTTCACTCCTCTAGGGATGGTCATTGCTATTGTTATGGGTATAACATTTCTGAGTGACACTCTTTTCCTAGGAAGTGTGATTGGAGCTGTTGCAATAGCTATAGGATTTTATTCTGTGATATGGGCACAGGCTCAAGAAGAGGAAAACATAGTAAACAACAATGAATTTATTCCATCTTCAACAGCGCCTCTGTTGCCCAAGAAAAGCATTGATTGCACATAA 1071 0.4127 MATRVVGISIIAAMISVQFLEVGLNTLVKSATTNGMSDYVFVFYSNLLAFFLLLPTTFFYYRNAPPPLPIPTSILCRVFLLSSLSTAVQTLMYTGIGYSSPTLCSVMVDLVPAFTFILAIFSRMENLNMKRHSSYAKIIGTIVSIAGALIVTLYKGMPLTSTSGLLPNKIGSFYLSADSNSNWILGGFLLAIASFCLSVLIVVQTWIMKDYPEELAVTTTACGFVVVLSAIVGMVGEHNKKAWIPKPDIQLLCIFYSAIFVVSTRSVVIAWACRKKGPVYVAMFTPLGMVIAIVMGITFLSDTLFLGSVIGAVAIAIGFYSVIWAQAQEEENIVNNNEFIPSSTAPLLPKKSIDCT 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211560g00002 356 Pfam EamA-like transporter family 186 323 IPR000620 GO:0016020
Stsc211560g00002 356 Pfam EamA-like transporter family 10 152 IPR000620 GO:0016020
Stsc211560g00002 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 227 327 - -
Stsc211560g00002 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 155 - -
Stsc211560g00002 356 PANTHER WAT1-RELATED PROTEIN 11 335 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211560g00002 Stsc-Chr211560 42027 45603 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211560g00002 11 338 Nodulin-like Gene Family AT3G28050 43.713 1.56e-77 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211560g00002 - - gmx:100793168 414.461