Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211556g00014 ATGGATGGTAGGTGCAGGAAACAGAATAATATAATGGCAGTGGAAATTGCGATCCAGAGAGAGCTGGCACATAGGATGAAGGTGACAGCACCACATTTGAGACCATCAAATTCTAATTCTACTAAGGAGGTTTTTCCTTCACAGTTTACATCACCAAGTCAAGCTTCCAAGTCAATAGCATTACCAGGTTCAACTCCAAGGTTATCTTTGAGTCCAAACCTTTCTGGAACCAAGAGAAAGGAAACATTACCAGTAAGCACTGCTTCTAATCCTCCTCAACAAAATCGCCAACCGTTTCATCGCGATATCAGTCACAAAGCTGAAGCAGATGATAATGTATACTGCAAAATCTGCAACCTATCTTGCTCAAGTCCATTCAATCTCAAGCAGCATTTGATGGGCTACAAGCACAGGGAGAAACTGCTAGAACTCGAATCCGGCAAGAAATCCGGAACAAGTGAGAATAGTAGAAGCTATGAAAGGCATTGGTGTGATATGTGCAAAATTTCATGTATGAATGAAGAGTTGCTGAAGCTTCCTTTCAAGGTAAAAAGCACAAGGCTCAATTGA 570 0.414 MDGRCRKQNNIMAVEIAIQRELAHRMKVTAPHLRPSNSNSTKEVFPSQFTSPSQASKSIALPGSTPRLSLSPNLSGTKRKETLPVSTASNPPQQNRQPFHRDISHKAEADDNVYCKICNLSCSSPFNLKQHLMGYKHREKLLELESGKKSGTSENSRSYERHWCDMCKISCMNEELLKLPFKVKSTRLN 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211556g00014 189 SMART ZnF_U1_5 110 144 IPR003604 GO:0003676|GO:0008270
Stsc211556g00014 189 Pfam Zinc-finger of C2H2 type 114 137 - -
Stsc211556g00014 189 MobiDBLite consensus disorder prediction 32 98 - -
Stsc211556g00014 189 SUPERFAMILY beta-beta-alpha zinc fingers 99 143 IPR036236 -
Stsc211556g00014 189 Gene3D Classic Zinc Finger 102 155 - -
Stsc211556g00014 189 MobiDBLite consensus disorder prediction 30 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211556g00014 Stsc-Chr211556 60087 61565 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Stsc211556g00014 zf-met 3.6e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211556g00014 - - aip:107619886 244.973