Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211555g00025 GTGAGCAGTTTGGAGAATTTGAAGTTAGATAATTTGCCTATACGTAATGGAGAGCCTATGGCAATCAGCATATTTCTTCAACTGCACCGTCTCTTAGCCACCGATGATGTGATTGGAGGAGACACTAACAATAATGTGATAATCAATCAAAGTCCAGATTCAGCACTGTCACTAGCAACTCATCACCGTTTCACTCAAAGCCCAATAGCAAAGATGGAGTGCTTTCTGTACGGACTCTGGAAGCTCCAACCAAAAGTGATGGTGATGACGGAGCAAGAATCAGATGTGAATGGACGATCCTTAAGGGATAGGGTGGAGAAAGCCTTGCATTTCTACGCGGCGCTGTTTGATTGCTTGGAAGCAGGGGGACCGAATCCTATAAAGAGGATGATGGTTGAGAGGGGGATGTTAGGAGAGCAAATAAAGAACATAATTGCGTGTGAGGGAGGGGACAGAAAAGAAAGGTATGAGAGGCTTAAGGAGTGGATCCCAAGGCTTGAACTTGCTGGATTTCGTGCTGCTGAGATTGGTTTGGAAGGGATGTCAAGAGGGTTAGTGGAGTTGCAGGATTATGCGGGTAATTATAGGATTGTTAGAGATGATAGATCTTTGTTTGTGTGCTGGAATGATATTCCTCTGTTTTCTCTATCGGCTTGGAGATATTTGTGA 669 0.4425 VSSLENLKLDNLPIRNGEPMAISIFLQLHRLLATDDVIGGDTNNNVIINQSPDSALSLATHHRFTQSPIAKMECFLYGLWKLQPKVMVMTEQESDVNGRSLRDRVEKALHFYAALFDCLEAGGPNPIKRMMVERGMLGEQIKNIIACEGGDRKERYERLKEWIPRLELAGFRAAEIGLEGMSRGLVELQDYAGNYRIVRDDRSLFVCWNDIPLFSLSAWRYL 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211555g00025 222 ProSiteProfiles GRAS family profile. 1 220 IPR005202 -
Stsc211555g00025 222 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 7 215 IPR005202 -
Stsc211555g00025 222 Pfam GRAS domain family 2 220 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211555g00025 Stsc-Chr211555 111511 112179 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211555g00025 1 220 GRAS Transcription Factor Family AT1G50420 36.000 1.23e-44 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc211555g00025 GRAS 2.5e-46 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211555g00025 - - aip:107632524 311.997