Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211550g00010 ATGGAATTGGGTCCTATGTCTTTCTTGCTCATGCTATTTTGCATTTCAGCTCTCTTAATCAAACTCCTCAAACTCAATGATTCATCAAAGAAATCAAAGAAACTTAGGCTCCCACCAGGTCCCAAACCATGGCCTATAATTGGCAACCTCCTTGAAATGATTGCTAACAAACCCACTCTTAGATGGATACAAAACATCATGAATGATCTCAAAACCGAAATTGCATGCATCCAATTAGGTAACGTACATGTCATCCCAGTGATTAGTCCTTCCATTGCACGCGAGATTTTAATGAAACAAGATGCGATCTTCGCATCGAGACCATTGAGTTGGTCAAGTAAATATGTCTCGTCGGGATACTTAACCACAACTATAACACCGTTTGGAGAACAATGGAAGAAAATGAAGAGAGTCATAGTTGAGGAATTGATTTCGCCTAAAAGGCATCAATGGCTGCATGACAAAAGGATGGAAGAAGCCGACAACCTTGTCCATTACGTGTATAACCAAATCAAGAATGGTAATGGCCTTGTGGATTTGAGGCATGTAGGGCAACACTATGGTGGAAACTTGATTAGGAGGTTGCTCTTCAATAAGAGGTACTTTGGTAATGGTAGTGAAGATGGTGGTCCTGGTGCTGAGGAATTGGAGTATGTTGATGCACTCTTGCTTGTGGTAAGGCATATTTATGCGTTTTCTGTTTCTGATTATCTTCCATGGTTGAGGTGGTTTGATTTTGAGGGTCATAAGAAAATACTGAAGAAAGCTACTAATACCATAAAGAAGTACAATGATCCCATTATTAAGGAAAGGATTCATCAATGGAGGAATGGGACAAGGACACATCAAGAGGATTGGCTTGATGTTCTTATCTCGTTGAAAGATGCAAACAACAATCCATTTTTGACTATGGAGGAAATCAAGAGTCAAATTCTGGAAATTGCAGTTGGAACAATGGATAATCCATATAATAATGTTGAATGGGTACTTTCTGAAATGTTAAATCAACCAGAAATGCTTCAAAAGGCCATTCAAGAATTGGATATTGTGGTAGGAAAAGAGAGATTAGTGCAAGAATCTGACATTCCAAAGCTCAACTATGTAAAAGCGTGTTTAAGAGAAGGTTTTCGCCTTCACCCAATTGTTGACTTTAATATTCCTCACGTCTCAATGAAAGACACAATTGTTGCCAATTATTTCATTCCAAAGGGTAGCCATGTTCTAATTAGGAGGCAAGGTATTGGCCAAAACCCTAGAGTTTGGGAGGAGCCATTGAAATTCAAACCTGAAAGACATTTGAAGAAAGATGGATGTAATTTAACATTGGTTGAGCCAAATTTGGAGTTGTTCACATTCGGCATTGGAAGAAGAGGTTGCCCTGCAATCATACTTGGGACTACGGTGACTGTAATGCTCTTTGCAAGATTGGTTCATGGATTCACTTGGATTCCACCTCCCAATGAACCAGTCATTGATCTCACTGAACTTGGAAGGGACACCACAAAAGCTAAGCCATTAGTTGCCTTGGGAAAGCCAAGATTACCAGCCAAAGTTTATCATCAATTGATGAATTAA 1575 0.3937 MELGPMSFLLMLFCISALLIKLLKLNDSSKKSKKLRLPPGPKPWPIIGNLLEMIANKPTLRWIQNIMNDLKTEIACIQLGNVHVIPVISPSIAREILMKQDAIFASRPLSWSSKYVSSGYLTTTITPFGEQWKKMKRVIVEELISPKRHQWLHDKRMEEADNLVHYVYNQIKNGNGLVDLRHVGQHYGGNLIRRLLFNKRYFGNGSEDGGPGAEELEYVDALLLVVRHIYAFSVSDYLPWLRWFDFEGHKKILKKATNTIKKYNDPIIKERIHQWRNGTRTHQEDWLDVLISLKDANNNPFLTMEEIKSQILEIAVGTMDNPYNNVEWVLSEMLNQPEMLQKAIQELDIVVGKERLVQESDIPKLNYVKACLREGFRLHPIVDFNIPHVSMKDTIVANYFIPKGSHVLIRRQGIGQNPRVWEEPLKFKPERHLKKDGCNLTLVEPNLELFTFGIGRRGCPAIILGTTVTVMLFARLVHGFTWIPPPNEPVIDLTELGRDTTKAKPLVALGKPRLPAKVYHQLMN 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211550g00010 524 Pfam Cytochrome P450 38 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00010 524 SUPERFAMILY Cytochrome P450 38 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00010 524 Gene3D Cytochrome P450 23 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00010 524 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 6 520 - -
Stsc211550g00010 524 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00010 524 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00010 524 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00010 524 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00010 524 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00010 524 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00010 524 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00010 524 FunFam Cytochrome P450 9 30 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211550g00010 Stsc-Chr211550 86165 88389 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211550g00010 10 519 Cytochrome P450 AT5G05260 52.107 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211550g00010 - K12153 gmx:100809902 644.425