Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211550g00007 ATGGGTTTTATTACCACCACAACCACTAGCCTTTACTTGTACACTTTTGAAGCCTTTTGGCCTTCTTTGATTGCAATGATTTCTAGCTTCATAATGATCAAAACCCTAATATCTTATTTGTTAAAGAAATCACATGACAAAAAACCCAAACTACCCCCAGGTCCCAAACCATGGCCTATAGTTGGTAACCTCCCTGAAATGCTTAGCAACAAACCTGAGTATCAATGGATACACAAACTCATGCAAGACATGAACACTGAAATTGCTTGTATCCGCCTACTAGGAAATGTCCATGTTATCCCTGTGTCATGTCCCAACCTTGCTCTTGAATTTCTAAGAAAACATGATGCTGTTTTTGCATCAAGACCAAAGAACATATTCTCTGATCTTGTAAGTGGCGGATATTTAACTACAGTTCTTGTACCCTTTGGGGAACAATTCAAGAAAATGAAGAAAATCTTAGTCAATGAATTGTTGTCCCCAAAGAGGCATCAATGGTTTCAAGACAAAAGGGATCAAGAAGCTAACAATCTTATGTTTTATGTGTATAATGAATCCAAGAATAATAATAATAATAATGTGAATGTGAGAGTTGCTACACAACATTATTGTTGTAATGTTATTAGGAAAATGATTTTTAATAAAAGGTACTTTGGAGATGGTAGGAATAATATTAATATTATAGAAGGTGGGCCAGGTTTAGAGGAAGTTGAATATGTGGATGCGGTTTTCTGTTTGGTTTTTCATGTTTTTAGGTTTTGTGTTTCTGATTATTTTCCATGGTTGAGGGGACTTGACTTGGATGGGCAGGAGAGCAAAGTGAAGGAAGCTTTAAGGATTGTTAAAAAGTATCATGATCCAATTATTGAAGAGAGGATCAAACAATGGAATGATGGATTCAAGAGTGAACAAGAGGACTTTCTTGATGTTTTGATCTCTCTCAAAGATCCCAATAACAAGCCTTTCTTGACACCTGAGGAGATCAAAGCGCAAATTATAGAATTAATGATTGCGGTGGTAGACAATCCATCAAATGCAGCGGAATGGGCACTTGCTGAAATGATAAACCAACCAGAACTACTTCAAAGAGCTACCGAAGAAGTGGACAACGTGGTTGGAAGAGAGAGAATGGTTCAAGAATCTGATATTCCTAAACTCAACTATATAAAAGCTTGTTTAAGAGAAGCTTTTCGCCTTCATCCAATTGTAACATTTAATGCTCCCCATGTCTCAATGGAAGACACCATAATTGGTGGCGAATACCTAATTCCAAAGGGTAGCCTAGTATTATTAGATAGACATTTACTTGGGAGAAACCCTAAAATTTGGAATGAGCCACACAAGTTCGATCCACAACGGCACCTAATAAATAGCAAAGGGCGCGACAAAGTCATTTTGACCGAGCCAGATCTGAGGTTCGTATCATTTAGCATCGGAAGGCGCGGCTGTCCCGGAGTGACACTTGGGACTACAATGGTTGTGATGTTATTTGCAAGGTTGATTCATGGCTTCACTTGGAGTCTGCCGCATGGTGTTTCAAAAATTGATCTTGCTTTGTCTAGAAATGGTATGCTTCTTGCTGAGCCACTTGTTGCCATAGCCAAGCCAAGATTGGAAGCAGGGTTGTATCAATTGAATTAG 1641 0.3845 MGFITTTTTSLYLYTFEAFWPSLIAMISSFIMIKTLISYLLKKSHDKKPKLPPGPKPWPIVGNLPEMLSNKPEYQWIHKLMQDMNTEIACIRLLGNVHVIPVSCPNLALEFLRKHDAVFASRPKNIFSDLVSGGYLTTVLVPFGEQFKKMKKILVNELLSPKRHQWFQDKRDQEANNLMFYVYNESKNNNNNNVNVRVATQHYCCNVIRKMIFNKRYFGDGRNNINIIEGGPGLEEVEYVDAVFCLVFHVFRFCVSDYFPWLRGLDLDGQESKVKEALRIVKKYHDPIIEERIKQWNDGFKSEQEDFLDVLISLKDPNNKPFLTPEEIKAQIIELMIAVVDNPSNAAEWALAEMINQPELLQRATEEVDNVVGRERMVQESDIPKLNYIKACLREAFRLHPIVTFNAPHVSMEDTIIGGEYLIPKGSLVLLDRHLLGRNPKIWNEPHKFDPQRHLINSKGRDKVILTEPDLRFVSFSIGRRGCPGVTLGTTMVVMLFARLIHGFTWSLPHGVSKIDLALSRNGMLLAEPLVAIAKPRLEAGLYQLN 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211550g00007 546 Pfam Cytochrome P450 52 520 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00007 546 Gene3D Cytochrome P450 44 541 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00007 546 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 476 485 IPR017972 GO:0005506|GO:0016705
Stsc211550g00007 546 SUPERFAMILY Cytochrome P450 52 537 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00007 546 PRINTS E-class P450 group I signature 107 128 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00007 546 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00007 546 PRINTS E-class P450 group I signature 432 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00007 546 PRINTS E-class P450 group I signature 473 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00007 546 PRINTS E-class P450 group I signature 327 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00007 546 PRINTS E-class P450 group I signature 347 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00007 546 PRINTS E-class P450 group I signature 483 506 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00007 546 PRINTS E-class P450 group I signature 390 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00007 546 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 26 544 - -
Stsc211550g00007 546 FunFam Cytochrome P450 9 44 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211550g00007 Stsc-Chr211550 64049 67033 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211550g00007 7 543 Cytochrome P450 AT4G39950 49.722 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211550g00007 - K12153 gmx:100809902 691.034